KEGG   Lotus japonicus: Lj0g3v0332899.1
Entry
Lj0g3v0332899.1   CDS       T04348                                 
Symbol
Lj0g3v0332899.1
Name
(Kazusa) -
  KO
K12606  CCR4-NOT transcription complex subunit 9
Organism
lja  Lotus japonicus
Pathway
lja03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Lj0g3v0332899.1 (Lj0g3v0332899.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lja03019]
    Lj0g3v0332899.1 (Lj0g3v0332899.1)
Messenger RNA biogenesis [BR:lja03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     Lj0g3v0332899.1 (Lj0g3v0332899.1)
SSDB
Motif
Pfam: Rcd1 NeA_P2
AA seq 331 aa
MFQRRQQQKEADMLSDMANLSQAFGGGAGAPPPPPPPPHGGPSSSNKMAGAEQLVLELSN
PDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPTLTPAQSNRVC
NALALLQCVASHPDTRMQFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDD
TEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGR
VLGNMVGALAEQQSTRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDTT
TRRWLQQLLHNVGSGRVPAMQAGGFDHIMVN
NT seq 996 nt   +upstreamnt  +downstreamnt
atgtttcagagaagacagcagcagaaagaagctgatatgctcagtgacatggccaatttg
tcacaagcattcggtggcggtgccggtgctccaccaccgccacctcctcctcctcacggt
ggtccctcctcatccaacaagatggccggtgcggagcagcttgtccttgaactcagcaac
cctgatctccgtgaaaatgctcttctcgaactctccaagaaaagggagctgtttcaagat
cttgctccattgttatggaattcttttgggactattgctgcacttttgcaggaaatagtt
tctatataccctgtcctttcaccacccactcttactccagcgcaatcaaatcgggtgtgc
aatgctcttgctcttcttcagtgtgtggcgtctcaccctgatacaaggatgcaattcctc
aatgctcatatccctctgtatctgtatcctttccttaatacaacaagcaagtcaagacca
tttgagtacctgaggctcaccagtcttggtgtcattggtgcattggtgaaggttgatgat
acggaggtcataagttttcttctttcaactgagataattcctctttgcctgcgcaccatg
gaaatgggcagtgaactgtcaaaaacagttgcaacatttattgttcaaaagattctgttg
gatgatgtgggcttggattatatttgcactacagcagagcgttttttcgcagtaggtcga
gttttagggaacatggtgggagctcttgctgagcagcaatcaactcgtctgctgaaacat
atcattcgatgctatcttcgcctttctgataatccaagggcttgtgatgcattaagaagc
tgtcttccagacatgttaagggatgctactttcagcagttgccttcgtgaggacaccaca
actaggaggtggctacagcaactgcttcacaatgttggatcaggtcgggtccctgcaatg
caagctggaggtttcgatcatataatggtaaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

Download RDF
DBGET integrated database retrieval system