KEGG   Lotus japonicus: Lj0g3v0364339.1
Entry
Lj0g3v0364339.1   CDS       T04348                                 
Symbol
Lj0g3v0364339.1
Name
(Kazusa) -
  KO
K14571  ribosome biogenesis ATPase
Organism
lja  Lotus japonicus
Pathway
lja03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Lj0g3v0364339.1 (Lj0g3v0364339.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lja03009]
    Lj0g3v0364339.1 (Lj0g3v0364339.1)
Ribosome biogenesis [BR:lja03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    Lj0g3v0364339.1 (Lj0g3v0364339.1)
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N AAA_5 AAA_25 AAA_22 Nucleolin_bd RNA_helicase AAA_2 AAA_16 AAA_14 AAA_11 AAA_18 TIP49 Viral_helicase1 NB-ARC nSTAND3 Zeta_toxin AAA_28 NACHT IstB_IS21 AAA_33 AAA_17 Parvo_NS1 Bac_DnaA
AA seq 786 aa
MRRRNALQETLRRRVEACKSTHATAAEIVKHLRFTYSADYHRTKRQTLTRLVHEALQSTT
TAAAAANTPTTRKLVHDDDGVDECRKKRRKTDEGEVRLQIVEASVPRDSERGLVRLKTNL
RELYKGTVTKNVELEMGNSRKATSTVNEGEVEVKGKRFRDFGGMKKVLERLKREVLLPLC
HPKEWRMLGHKPEVSGVLLHGPPGCGKTELAHAIANETRLPLYPISATALVSAGSGSSEA
NIRDLFSKAYKTAPSIIFIDEIDAIASKRENSQHGMENRMVSQLLTCMNQSVLDSESSSS
VLVIGATNRPDAVDPALRRPGRFDCEINIGIPDESAREDILSVLTRGLLIEGPIDLKKLA
RSTPGFAGADLVCLVKIAGKLAMLRIVDERYVMREFLEDWLMESWSREERDKLALKMSDF
EEAIKVVQPSTRREGFSSIPNVKWEDVGGLDSLRDEFEDFIIGRIKDPELYEELGPQLSE
RCMEERNSMGPKQLDERPSVCRPLKLNPLEKVVHTGKLGLGDYHLRLLMCTIFCMEVSTE
VAFFECAHQGCCALGPIILRLDFCFMDLQGPELLNKYVGESELAVRTLFSRARTCAPCIL
FLDELLTELDGKEQRKDVYVIGTTNRPEAVDRAILQPGRLGKHLYVPHPSPEDRVKILKA
LARDTRLDAGVDLNVIGRMEACENMSGAELRALMGEVERDARREVRAGTNTTRTIKTHHF
DAAFSKISASKSDKIFNVNLRLSKVKYHTELVEANGDMLSSWQLLTKLISILALYESLFP
VAYFHD
NT seq 2361 nt   +upstreamnt  +downstreamnt
atgaggagaagaaacgcgctgcaagaaacccttcgccgccgcgttgaggcctgcaaatcc
acacacgccaccgccgccgaaatcgtgaaacatctccgctttacttactctgctgattac
caccgaaccaagcgccaaactctaacgcgacttgttcacgaagctcttcaatccactacc
accgcggccgctgccgccaacactcctacaacacggaagctcgttcatgacgacgacgga
gttgatgagtgtcgaaagaagcggaggaaaacagatgaaggtgaagtgcgattgcaaatt
gtggaagcgagtgtgccgcgcgattcggaacgtggtttggtcaggctgaagacaaattta
cgggagttatataagggtacagttacaaagaatgttgaattggagatgggtaatagtaga
aaggcaactagtactgtgaatgaaggtgaggttgaggtgaaggggaagaggtttagggat
tttggtgggatgaagaaggttttggagagattgaagagggaggtgttactgccactgtgc
catcccaaggagtggagaatgttaggacataagccagaagtatcgggggttttgttgcat
ggacctcctggctgtgggaagactgaactggctcatgctattgctaatgagactcgtctt
cctctctatcccatttcagctactgccttggtgtctgcaggctcaggttcatctgaagcg
aatattagagaccttttctctaaagcatacaaaactgctccctcaattatctttattgat
gagattgacgcaattgcttcaaaaagagagaattcacagcatgggatggagaatcgaatg
gtttcacagttacttacttgcatgaatcaatcagttcttgattcggagagtagtagctct
gttcttgtaattggagctacaaataggccagatgctgttgaccctgcccttagaaggcct
ggtagatttgattgtgagattaatataggcattcctgatgaatctgctagggaggacata
ctttccgtgctaactcgcggtcttttaatcgagggtccgattgatctaaaaaagttagct
aggtctacgccaggatttgctggcgcagatttggtgtgtctagttaaaatagcgggcaag
ttggcgatgttaagaatagttgatgaaaggtatgtcatgagggagtttcttgaagattgg
ttgatggagtcttggtcacgtgaagaaagggataagcttgccctcaaaatgtctgatttc
gaggaagctatcaaagttgtacaaccgtcaacaagaagagaagggttctcttccattcca
aatgtaaagtgggaagatgttggtgggcttgattcgttaagagatgagtttgaagacttt
attataggccgtattaaagatcctgaactttacgaggagttaggaccccaattgagtgaa
agatgtatggaagaaagaaattctatgggaccaaagcagctagatgagagaccatctgtg
tgcaggccgctgaaactcaatcccctggagaaggttgtccatactggaaagctgggattg
ggtgattaccatcttcggctcttgatgtgcaccatattttgcatggaagtcagcacagaa
gttgccttctttgagtgtgcacatcaagggtgctgtgctttgggtccgatcatcttgaga
ctggatttttgctttatggacctccagggacctgaactactaaataaatatgttggagaa
agtgagcttgcagttcggacattgtttagtcgtgcaaggacatgtgcaccttgtatactt
tttctcgatgagttgctgaccgagttagatggaaaagagcagcggaaggatgtttatgtg
attggtacaacaaataggcctgaggcggtggatcgcgctattttacagcctggtaggctt
ggaaaacatctttatgttcctcacccaagtccagaagatcgggttaagatattgaaagct
cttgcaagagatacgcgccttgatgccggtgtggatttgaatgtcataggaagaatggaa
gcttgtgaaaacatgagtggtgctgaacttagggcactgatgggcgaagtggaaagggat
gctcgtagagaggtaagggccggaactaatacaacccgtaccatcaagacacatcatttt
gatgcagcgttcagtaaaatctctgcctctaagtcagacaagattttcaatgtgaatttg
cggctttctaaggtaaaataccacacggagctagtagaagccaacggtgacatgctttca
agttggcagcttctgacaaagctaatctccattcttgcactttatgagagtcttttccca
gtagcctattttcatgattag

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