KEGG   Lotus japonicus: Lj2g3v0561300.1
Entry
Lj2g3v0561300.1   CDS       T04348                                 
Symbol
Lj2g3v0561300.1
Name
(Kazusa) -
  KO
K12590  exosome complex component RRP46
Organism
lja  Lotus japonicus
Pathway
lja03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Lj2g3v0561300.1 (Lj2g3v0561300.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lja03019]
    Lj2g3v0561300.1 (Lj2g3v0561300.1)
Messenger RNA biogenesis [BR:lja03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     Lj2g3v0561300.1 (Lj2g3v0561300.1)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
AA seq 228 aa
MEIDRADGRSPNQLRPLACSRSVLHRAHGSASWAQGETKVFAAVYGPKAGTKKNENPEKA
SIEVTWKPNTGQIGQVEKEYEMILKRTLESICIRSIYPNTTTSVIVQVVHDDGALLPCAI
NAACAALVDAGIPLRHLAVAICCSVADNSCIILDPTKQEEEKAKAFAYLVFPNTNISVLP
EGSSQGGSEPMAHGIITSVTQGAMSVDDYLRCLERGRATSERLSEFLR
NT seq 684 nt   +upstreamnt  +downstreamnt
atggagattgatagggctgatgggaggagtcccaatcaactaaggcccctggcatgctct
cgttccgtccttcacagagcccacggctcagcctcctgggctcaaggagaaactaaagtc
tttgctgcagtttacggacccaaagctggaaccaagaagaatgaaaaccctgaaaaagct
tccattgaagttacttggaagcctaacacaggacagattggtcaagtggagaaggagtat
gagatgatattgaagagaaccttggaaagcatatgcattcgaagcatatatcccaacacc
accacttccgttatagtccaggttgtccatgacgatggtgctcttcttccatgtgcaatt
aatgcagcatgcgctgcacttgttgatgctggaatccccctaagacatcttgctgttgca
atatgttgttctgtagcagataatagttgtattatactcgacccgactaaacaagaagag
gagaaagcgaaagcatttgcctatttagtttttccaaacacaaatatttcagtgctacca
gaggggtcatcgcaggggggcagcgagcccatggcacatggaatcatcacctctgttaca
cagggtgctatgtcagtggatgattatcttcgttgcctagaacgagggcgtgctactagt
gaaagattgtctgaatttttaagg

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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