KEGG   Lotus japonicus: Lj2g3v0690370.1
Entry
Lj2g3v0690370.1   CDS       T04348                                 
Symbol
Lj2g3v0690370.1
Name
(Kazusa) -
  KO
K03267  peptide chain release factor subunit 3
Organism
lja  Lotus japonicus
Pathway
lja03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Lj2g3v0690370.1 (Lj2g3v0690370.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lja03019]
    Lj2g3v0690370.1 (Lj2g3v0690370.1)
   03012 Translation factors [BR:lja03012]
    Lj2g3v0690370.1 (Lj2g3v0690370.1)
Messenger RNA biogenesis [BR:lja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     Lj2g3v0690370.1 (Lj2g3v0690370.1)
Translation factors [BR:lja03012]
 Eukaryotic type
  Release factors
   Lj2g3v0690370.1 (Lj2g3v0690370.1)
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 G-alpha
AA seq 508 aa
MDLEEDIRSLQLDSAAEDNNGVVNREDGKEEVEKSDKMDEDPNQEVKAQAAEAQEVQAQA
IEAEPTVNEEISVAPDEEEEPAMKKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQ
KYEKEAKDKSRESWLYMAYIMDTNEEERVKGKTVEVGRAHFETETSRFTILDAPGHKSYV
PNMISGASQADIGVLVISARKGEFETGYEKGGQTREHVQLAKTLGVAKLLVVVNKMDDPT
VNWSKERYDEIESKMIPFLKQSGYNVKKDVLFLPISGLMGSNLKTRLDKSTCPWFNGPCL
FEALDSIEGPPRDPKGPFRMPIIDKFKDMGTVVMGKVESGSIREGDSLLVMPNKVQVKVV
AVFIDEERVKRAEPGENLRVRVSGIEEEDLLSGFVLSSVAKPIPSVTEFVAQLVILELLD
NAIFTAGYKAVLHIHSVVEECEIVELLHQIDPKTKKSMKKKVLFVKNGAVVLCRVQVNSM
ICIEKFSDFPQLGRFTLRTEGKTVAVGK
NT seq 1524 nt   +upstreamnt  +downstreamnt
atggatcttgaggaggacattcgttctttacagctcgattcagcagcagaagacaataat
ggggtggtaaatcgagaggatggaaaggaagaagtagagaaatctgacaagatggatgaa
gatccaaatcaggaggttaaggcacaggctgctgaggctcaggaggttcaggcacaggct
attgaggctgagccaacagtgaatgaggaaatctccgtggccccagatgaagaagaggag
cctgcaatgaagaaaagacacttgaatgtcgtattcataggccatgtcgatgctggtaag
tctacaacaggaggccagatacttttcctcagtggtcaggttgatgaacggactatccaa
aaatatgagaaagaagctaaggacaaaagtcgtgaaagctggttgtatatggcctatatt
atggatacaaatgaggaggagagggtcaagggaaagacagttgaagttggaagagctcat
tttgagacagagacatctaggttcaccattttggatgcacctggtcacaaaagctatgtt
cctaatatgatcagtggtgcatctcaagctgatattggagtgttggtaatttctgctcgg
aagggagaatttgaaactggatatgagaaaggtggtcagactcgtgagcatgtccagctt
gcaaaaactcttggagtggctaagctgcttgttgttgtcaacaaaatggatgatcctact
gtaaactggtcaaaagaaaggtatgatgaaattgagtcaaagatgattccatttcttaag
caatcgggatacaatgtaaagaaagatgtcttgtttttaccaatatcggggctgatgggc
tcaaacttaaaaacaagattggataaaagcacttgtccatggtttaatgggccttgctta
tttgaagcccttgattctattgaaggacctcctcgagatcccaaaggtccttttaggatg
cctataattgacaaattcaaagacatgggaactgttgttatgggtaaagtggaatctggt
tctattcgtgagggagattccttgttggtcatgccaaataaggttcaagttaaagttgtt
gctgtatttattgatgaagaacgggttaagcgtgctgaacctggtgaaaacttgcgggtt
agagtatctggtattgaagaagaagacttattatctgggtttgttttgtctagtgttgca
aaaccaattccatcagttactgagtttgttgctcagttggttatccttgaattgctggac
aatgccatctttactgctgggtacaaggctgttctgcatatccactctgtagttgaggaa
tgtgaaatcgtggagctcttgcatcaaattgatccgaagacaaaaaagtctatgaaaaaa
aaagtcctctttgtgaagaatggcgctgttgtattatgccgtgttcaggttaatagcatg
atatgcattgagaagttctctgactttccgcaactagggaggtttactcttcgcactgaa
ggaaaaactgttgctgttgggaaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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