KEGG   Lotus japonicus: Lj2g3v1758490.1
Entry
Lj2g3v1758490.1   CDS       T04348                                 
Symbol
Lj2g3v1758490.1
Name
(Kazusa) -
  KO
K03124  transcription initiation factor TFIIB
Organism
lja  Lotus japonicus
Pathway
lja03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Lj2g3v1758490.1 (Lj2g3v1758490.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lja03021]
    Lj2g3v1758490.1 (Lj2g3v1758490.1)
Transcription machinery [BR:lja03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     Lj2g3v1758490.1 (Lj2g3v1758490.1)
 Prokaryotic type
  Archaeal type
    TFB
     Lj2g3v1758490.1 (Lj2g3v1758490.1)
SSDB
Motif
Pfam: TFIIB Cyclin_C HTH_Mga TF_Zn_Ribbon HTH_23
AA seq 346 aa
MEKEKMKCPYCSAAAGRCATTSSGRSITECTSCGRVMEERQSHPHHVFHLRAQDNPLCLA
TSDLPLPTLHHQNDAGDEEDPFEPTGFLTAFSTWSLEPSPLYLQSSIAFSGHLAELERTL
ESSSSSSATVVVDNLRAYMQIIDVASILGLDCDISDHAFQLFRDCCSATCLRNRSVEALA
TAALVHAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRF
CTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVT
GLTEVTLRKVYKELLENWDDLLPSNYTPAVPPEWAFPTTVIASVRP
NT seq 1044 nt   +upstreamnt  +downstreamnt
atggaaaaggagaaaatgaagtgtccgtactgctcggcggcggctggccgttgcgccacc
acgagctccggcaggtcaataacggagtgcacgtcttgcggccgggtcatggaagagcga
caatcgcatccccaccacgtcttccacctccgcgcccaagacaaccctctgtgcctcgcc
acctccgatctccctctcccgactctccaccaccaaaacgacgccggcgacgaggaggac
cctttcgaacccacgggcttcctcaccgcgttctccacctggtccctggaacccagcccg
ctttaccttcagtcctccatcgcgttctccggccacctcgctgaactcgagcgcactctc
gaatcgtcttcttcttcttcagctacagtcgtggttgataacttgagggcgtacatgcag
attatcgatgttgcctccattctgggcttggattgcgatatctccgatcacgcttttcaa
ttgttcagggattgttgctccgccacttgcttgagaaaccgcagtgtggaggctcttgcc
accgccgctcttgttcatgccattcgagaggctcaagagcccagaaccctccaggaaatt
tcaattgcggccaatgtgccgcagaaggaaatagggaaatacatcaagatacttggagaa
gctttgcagctaagtcaacctattaacagcaactccatttcagttcatatgccaagattt
tgcacacttctccagctcaataaatctgctcaggaactggctactcacataggagaggtt
gtgatcaacaaatgcttctgcactcgtaggaatccaattagcatctcagctgctgctata
tatttagcttgccaacttgaagataaacgcaaaacacaagctgaaatttgcaaggtaact
ggacttactgaagtcaccctccgtaaagtgtacaaggaactattggagaattgggatgat
ttacttccctctaattacaccccagctgttcctcctgagtgggcattccccacgactgta
attgcctctgttcgtccttgaaca

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system