KEGG   Lotus japonicus: Lj2g3v1988820.1
Entry
Lj2g3v1988820.1   CDS       T04348                                 
Symbol
Lj2g3v1988820.1
Name
(Kazusa) -
  KO
K10875  DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
lja  Lotus japonicus
Pathway
lja03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Lj2g3v1988820.1 (Lj2g3v1988820.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lja03400]
    Lj2g3v1988820.1 (Lj2g3v1988820.1)
DNA repair and recombination proteins [BR:lja03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     Lj2g3v1988820.1 (Lj2g3v1988820.1)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII ERCC3_RAD25_C
AA seq 970 aa
MHRNNNNTIAGRTRSKKALAPVNHPKNDVVALSSDDDDGGDDGTTTVGVQESQTTTDALP
ECGVKRGRAKRKVVRIVESDGEVKVNLTRRRKFGLDVLIDEKSNVESAEEETGTSDGPAR
RTRSHFRGSKKLKLGGTLNQPICLDGEEEEEGGGDGDGVLESGEEGAKTCRGGGWSDEEG
EESESEDEMDDDPIWRSWKCSGNRRNKHGGERLKGDGSVCESEKERGGSSWRKGSAIQRN
KRTPELNKGVDSPKTVKKHFNTQRENPQPEEKSVEEKELEALWIESDYCFSLIQDNNASP
SEPPDLCRGGKLEHDVFLDEEIGLRCRSCLRVLTEIKYVFPSFATPPRKKKYSYALDDVD
PSVSSEFQDRVVGDDDDAHNDNYNYNGTVWEIIPGVKENMYPHQCEAFEFLWTNLAGGII
HNKLKGKKELPVAGGCLISHAPGTGKTRLTIMFLQSYMELYPKCRPIIIAPKGILGTWEE
EFKTWKVDIPFHNMNSTDCSDNVRDHVMNLVSGRNVSKHVLISYCRMAKLYYWRSEKSIL
GISYNLFEQFTKKDSDERKFLLEVPGLVVLDEGHTPRNSKSLIWKSVSEIRTTKRIILSG
TPFQNNFDELYNTLCLARPQFTKCNPNEKGESLRNESKGRWAYLTSSLAKVTDNGRRSKI
LQEIRNMICPFVHVHHGTILQESLPGLRKLVVTLNPTILQKNVFEDIERKRSSHLAQGNS
NVLKLEYEETLTAIHPALYGLSERMNLPRFRLNPEEGVKTKFLLELIRLCEIRNEKVLVF
SQYIDPLKLLASQLEHLFCWKEGTDVLQLHGKVDAKLRQTSIKAFNDPDSNVKVMLASTR
ACYEGISLVGASRVVLLDVVWNPSVERQAISRAYRLGQKKFVYTYHLITAGTRDEDKCCR
QAEKDHLSKMVFFNSGRDQHHQNVSSAELGDQILEDLIQHKKIGHIFEKVAVIHEETNSN
LKKDFFPLLV
NT seq 2916 nt   +upstreamnt  +downstreamnt
atgcatcgcaacaacaacaacaccattgcagggagaactcgcagcaagaaagccctagct
cccgtcaatcatcccaagaacgacgtcgttgccctcagttccgatgacgacgacggcggc
gatgatggcaccaccaccgttggagttcaagaaagtcaaaccaccaccgacgcgcttccg
gaatgcggtgtgaaaagagggagggcgaagcggaaggtagtcagaatcgtggagagtgat
ggtgaggtgaaggtgaatctcacgaggaggagaaagtttgggttggacgttctgatcgat
gagaagagcaatgtagagagtgcagaggaggaaactggaacgagtgatggtccggcacgg
aggacccgttcgcattttcgggggagcaagaaattgaaattaggggggaccttgaatcaa
cccatttgccttgatggtgaagaagaagaagaaggtggtggtgatggtgatggtgttctt
gaatctggagaagaaggagcaaagacatgcaggggaggtggttggtctgatgaagaaggg
gaagagtcggagagcgaggatgagatggatgatgatccaatttggaggagttggaaatgc
tctggaaacagaagaaacaaacatggtggtgagcgattgaagggtgatggcagtgtttgt
gagagtgagaaagagaggggtggttcaagttggaggaaaggctctgcaattcaaagaaac
aaacgcacccctgaactgaataaaggtgtggattcgccaaaaacagtgaaaaagcacttt
aacacacaaagggagaatcctcagccagaagagaaatcagtagaggagaaggaattggag
gctctttggattgagtctgattactgttttagccttatccaagacaataatgcctcacct
tccgagcctccggatttgtgtcgtggagggaaattggagcatgatgtctttcttgatgaa
gaaattggacttcgatgtagatcttgcctacgcgtcctaactgagatcaaatatgttttt
ccctcttttgcaactccaccgcgaaagaagaaatactcttacgctttggatgatgttgat
ccctctgtaagctctgagtttcaagatagagttgtaggagacgatgatgatgctcacaac
gacaattacaattacaatgggacagtgtgggaaataattcctggagttaaagaaaacatg
taccctcatcaatgtgaggcatttgaatttctgtggaccaatttagctggcggaatcatt
cataacaagttgaaagggaaaaaggaacttcctgtggctggtggatgcctaatatctcac
gctcccggcaccgggaaaactaggctcactatcatgtttcttcagtcatacatggagtta
tatccgaagtgcagaccaataatcattgctcctaaagggattctcggtacgtgggaggag
gagtttaaaacttggaaggttgacattccctttcacaacatgaacagcactgattgctct
gacaatgtgagagatcacgttatgaaccttgtttctggtcgtaatgtctcaaagcatgtg
ctcatttcgtattgtcgtatggctaagttatattattggaggagtgaaaagagcatcttg
ggaatcagctacaacctgtttgagcaatttactaagaaggactcagatgaaaggaaattc
cttcttgaagttcctggtttagtagttcttgatgagggtcacactcctaggaattcaaag
agtcttatatggaaatctgtctcagaaatccggacaacaaagcgcatcatcctctccgga
acaccatttcagaataactttgatgagctgtataacacgctgtgtttggcgaggcctcag
tttactaaatgcaatccaaatgagaagggggagagccttagaaatgaaagcaaagggaga
tgggcgtaccttaccagttcattggccaaagttaccgataatggtagaagatctaagata
ttgcaagagatcagaaacatgatttgtccttttgttcacgtgcaccatggaaccattctg
caggagagtttaccagggttgaggaagttggtagttaccttaaatccaaccattttgcaa
aagaacgtttttgaggatattgagagaaaaagaagtagccatcttgctcagggaaactca
aatgtgctaaaattagaatatgaggagactctaactgctattcatcctgcactctatggt
ctatctgaaagaatgaatctcccaaggtttagattgaatcctgaggaaggtgtcaaaacg
aaatttctgttggaactcataaggctttgtgagattcgaaacgagaaggtgttggttttc
agccaatacatcgatcctttgaaacttttggcaagccaacttgaacatcttttttgttgg
aaggaaggaacagatgtgttacaattgcatggaaaagttgatgcaaagctgcgtcaaact
tcaattaaagcttttaacgatcctgacagcaatgtaaaggtgatgctagcatcaaccagg
gcttgttatgaaggtatcagtttggttggagcctcaagggttgttttacttgatgtcgtg
tggaatccctcggtggagaggcaagcgataagtcgtgcttaccggctcgggcagaagaaa
tttgtgtacacttaccatctgatcacggcagggacaagggatgaggataaatgttgtcgt
caagctgagaaagatcacttgtccaagatggtgttctttaattccgggcgggatcagcat
catcagaatgtttcatcagcagaattgggggatcaaattctggaagacttgattcagcat
aaaaagattgggcatatatttgaaaaagtagctgttatccatgaagaaacaaactccaat
ctgaagaaggattttttccccctcttggtataaatt

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (10)   

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