KEGG   Lotus japonicus: Lj2g3v2827810.1
Entry
Lj2g3v2827810.1   CDS       T04348                                 
Symbol
Lj2g3v2827810.1
Name
(Kazusa) -
  KO
K14809  ATP-dependent RNA helicase DDX55/SPB4 [EC:3.6.4.13]
Organism
lja  Lotus japonicus
Brite
KEGG Orthology (KO) [BR:lja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lja03009]
    Lj2g3v2827810.1 (Lj2g3v2827810.1)
Ribosome biogenesis [BR:lja03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    Lj2g3v2827810.1 (Lj2g3v2827810.1)
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII NACHT
AA seq 539 aa
MDSSEFPNKALTSTRFSELNPPLSEPVLQALTDSGFDFCTPVQAATIPLLCSFKDVAVDA
ATGSGKTLAFVLPLVEILRRSSPKPKPHQVLGIIISPTRELSSQIYHVAQPFISTLVNIK
SMLLVGGVDVKADMKKIEEEGVNILIGTPGRLHDIMNRMDILDFKELEILILDEADRLLD
MGFQKQLTSIITQLPKLRRTGLFSATQTEAVEELAKAGLRNPVRVEVRAETKRANDPATA
KQLESSKTPSGLHIEYLECEADKKPSQLVDFLVKNRSKKIIIYFMTCACVDFWGTVLPHI
SVLKGFSLIPLHGKMKQTVREKALASFTSLSNGILLCTDVAARGLDIPGVDCIVQYDPPQ
DPNVFIHRVGRTARLGKQGHAVVFLLPKEDSYVEFLRIRRVPLQEIRCSDDAPDVVPQIR
SAAKKDRDIMEKGVKAFVSYIRAYKEHHCSYIFRWRELEIGKLAMGHGLLRLPLVPEVKQ
NSLSTKGFEPVEDINFEDIKYRDKSREKQRKKNLQVKKEAKEKEPRPKKLSKTPNAQTD
NT seq 1617 nt   +upstreamnt  +downstreamnt
atggattcttccgagttcccaaacaaagcgttaaccagcacgcgtttctccgagctgaac
ccgccactatctgagccggttctccaagccctaacagactccgggttcgacttctgcacc
cctgttcaagccgccacgattcctttgctatgcagcttcaaggacgtcgccgtcgacgcc
gccaccggttccggcaaaaccctagcttttgtcctccctcttgttgagattcttcgccgc
tcttcccctaaacccaagcctcaccaggtactaggaataattatatctcctacaagggag
ctatcatcccagatatatcatgttgcacaacctttcatttcaactttagtgaatattaag
tccatgctcctcgttggtggagtggatgtaaaagcagacatgaagaaaattgaggaagaa
ggagtgaacatattgatcggcacacctgggcggttacatgacattatgaatcggatggat
atcttggattttaaagaacttgagatattgattttggatgaggctgatagactcttagat
atgggatttcagaagcagttaacttccattataactcagttgcccaagcttcgtagaact
ggtttgttctctgctactcaaactgaggctgtagaagagcttgctaaagcaggattgagg
aaccctgtgcgggttgaagttcgagcagaaactaaaagagcaaatgatcctgcaacagca
aaacaactagaatcttccaagacaccttcaggtcttcacattgagtacttggagtgtgag
gcagataagaagccatcacagctagtagatttccttgttaagaaccgctctaaaaaaatt
ataatatatttcatgacttgtgcttgcgttgacttttggggaactgtccttcctcacatt
tctgttttaaaaggcttctcattgatccctcttcatggaaagatgaagcagactgtcagg
gagaaagcacttgcttcatttacatccctttcaaatggaattcttctatgtaccgatgtt
gcagcacgtggacttgacataccaggtgtagattgtatagtgcagtacgatcctcctcaa
gatccaaatgttttcatacatagagttggtcgaacagctcggctgggtaaacaaggtcat
gctgttgtcttcttattaccaaaggaggattcttacgtagaattccttcgtatacgaaga
gttcctcttcaagagattagatgctctgatgatgcgcctgatgttgttcctcagattcgt
tctgctgcaaaaaaggatcgtgatatcatggagaagggtgttaaagcatttgtttcttac
atccgtgcttataaagagcatcactgctcttatatttttaggtggagagaacttgaaatt
gggaaattggctatgggacatggtttactgagacttcctttagtgccagaggtaaaacaa
aactctctttccaccaagggatttgaaccagttgaagatatcaattttgaggacattaag
tacagggataaatcgagagagaaacaacggaagaagaacctgcaagtaaagaaggaagct
aaggagaaagagccaagacctaaaaaactaagcaaaaccccaaatgcacaaactgac

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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