KEGG   Lotus japonicus: Lj2g3v3058550.2
Entry
Lj2g3v3058550.2   CDS       T04348                                 
Symbol
Lj2g3v3058550.2
Name
(Kazusa) -
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
lja  Lotus japonicus
Brite
KEGG Orthology (KO) [BR:lja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lja03021]
    Lj2g3v3058550.2 (Lj2g3v3058550.2)
   03036 Chromosome and associated proteins [BR:lja03036]
    Lj2g3v3058550.2 (Lj2g3v3058550.2)
Transcription machinery [BR:lja03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     Lj2g3v3058550.2 (Lj2g3v3058550.2)
Chromosome and associated proteins [BR:lja03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     Lj2g3v3058550.2 (Lj2g3v3058550.2)
    SLIK complex
     Lj2g3v3058550.2 (Lj2g3v3058550.2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C CHD1-like_C ResIII HDA2-3 DEAD SWI2_SNF2 OAM_alpha Sua5_yciO_yrdC
AA seq 1166 aa
MSVQGKMVDFQRKKSKASLRKLEQQPEWLKGGRLRDYQLEGLNFLVNSWRNDTNVILADE
MGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRAS
REVCQQYEFYNDKKPGKPIKFNALLTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQ
LYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNEKE
LANLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVR
GNQVSLLNIVVELKKCCNHPFLFESADHGYGGASGSNDNSKLERIVFSSGKLVILDKLLV
RLHETKHRVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDF
CFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSV
EEDILERAKKKMVLDHLVIQKLNAEGKLEKKEAKKGGSYFDKNELSAILRFGAEELFKEE
RNDEESKKRLLSMDIDEILERAEKVEEKEAGGEQGDELLGAFKVANFSNDEDDASFWSRW
IKPDAVYQAEEALVPRSARNIKSYAEADPCERSNNKRKKKEPELPERVQKRRKAEYSAPV
VPMIEGASAQVRSWSYGNLSKRDALRFSRAVMKYGNENQVDLIVAEVGGAVEAAPPEAQV
ELFSALIDGCTEAVELGNLDLKGPLLDFFGVPVKANDLLTRVQELQLLAKRISRYEDPIA
QFRVLSYLKPSNWSKGCGWNQIDDARLLLGIHYYGFGNWEKIRLDERLGLTKKIAPVELL
HHETFLPRAPNLRDRANALLEQELAVLGVKHTNNRVGRKPSKKEREQMNTSLLRGQEKKK
AGSVKVDVQMRKNRFQKTQKVEPIAKEEGEMSDNEEVYEQFKEVKWMEWCQDVMVEEMKT
LKRLHRLQTTSANLPKEKVLSKIRNYLQLLGRRIDQIVLEHEEEPYKQDRMTVRLWKYVS
TFSHLSGERLHQIYSKLKKEQEEAGVGPSHVNGSASVSFGRNGNPIHHHMERQRGLKNMT
SYQLPESVSSNTGKSEAWKRRRRAESEDHFQVPPQRSTSSGVQITDPNSLGILGAGPSDK
RFVSEKPYRTQPGGVPLRQSFSSGIN
NT seq 3501 nt   +upstreamnt  +downstreamnt
atgtcagttcaaggaaagatggtagatttccagcgtaagaagagcaaggcaagcttacgg
aagcttgagcaacaacctgaatggttaaagggtggaaggctccgtgattatcagcttgag
ggactgaattttcttgttaacagttggagaaatgatacaaatgtcattttagctgatgaa
atgggtcttgggaaaactgttcagtccgtatcgatgctcggttttctacagaatgctcag
cagatccatggtccttttcttgtggttgtgccattgtctactctatcaaactgggccaaa
gaattcaggaagtggcttcctgatatgaatatcattgtgtatgttggtactcgtgcaagt
cgagaggtgtgtcaacaatatgaattttataatgataaaaagcctggaaaaccaataaaa
ttcaatgcgctgttgactacatatgaagtagttttaaaggataaggctgttctctccaag
atcagatggaattatctgatggtagatgaggctcatagacttaaaaatagcgaggcgcag
ttgtatacaacgctttcggaatttagcaccaagaacaagttgcttatcacgggtactcct
ctacagaacagtgttgaagagctatgggctttgcttcacttccttgatcctgacaagttc
aagagcaaggatgattttgttcaaaactataagaatcttagttctttcaatgagaaagag
cttgcaaatcttcatatggaattgaggcctcatatacttagaagagttatcaaagatgtg
gagaaatcattaccccccaaaattgagcgtatccttagggttgaaatgtctcctcttcag
aaacagtattataagtggattttggaacgcaactttcataatttgaacaaaggagttcgt
gggaatcaggtttctctgctaaatattgtggtagaattgaagaagtgttgcaatcatccc
ttcctgtttgaaagtgctgaccatggctatggtggggcctcaggaagtaatgataatagt
aaactagagagaattgtctttagcagtggcaagctggtcatacttgataagcttcttgtt
agattgcatgaaaccaagcaccgtgttctaattttttctcagatggttaggttgttggat
atactaggagagtatatgtcacttcgagggtttcaatttcagaggcttgatggcagtact
aaggctgagctccgacagcaggcaatggatcatttcaatgcacctggtagtgatgatttt
tgcttccttctttcaacacgagctggaggtctgggtatcaaccttgccactgcagatact
gtcataatatttgactcagattggaatcctcaaaatgacctgcaggccatgagtagagct
catagaattgggcaacaagaagtggttaacatatatagatttgtgacaagcaaaagtgtt
gaggaagatattctggaacgcgctaagaagaagatggttctggaccacttggtgattcaa
aaattaaatgcagagggtaaactggagaagaaagaagccaaaaaaggaggaagttatttt
gataaaaatgagctgtctgcaatcttacggtttggagcagaggagctttttaaagaagaa
agaaacgatgaagaaagcaagaaacggctcttaagcatggatatagatgagattcttgaa
agagcagagaaggttgaagagaaggaagctggtggagagcaaggggatgagttattaggt
gcatttaaggttgccaatttttccaatgatgaagatgatgcaagtttctggagtcgttgg
attaagcctgatgctgtgtaccaagcagaggaagctcttgttccacgttctgcaagaaat
attaaaagttacgcggaggctgatccatgtgaaagaagtaataataaaagaaaaaagaag
gaacctgaactacctgaacgagttcagaaacggcggaaagcagagtattcagctcctgta
gtaccaatgatcgagggagcttctgcccaagtgagaagttggtcatatgggaatttatct
aaaagagatgcacttcgtttctctcgtgcagttatgaaatatggcaatgagaaccaagtc
gacttaattgttgctgaggttgggggtgcagttgaggcagctccacctgaagcacaggtt
gaacttttcagtgctctaattgatggctgtacagaagcggtggaacttggaaatctggat
ctaaaggggcctttgctggatttttttggcgtcccagtgaaggcaaatgatctactgacc
cgtgtccaagaacttcaactactagcaaagcgcattagtcggtatgaagatcccattgca
caattccgtgttttgtcatatctcaaaccttcaaattggtcgaaaggttgtggatggaat
caaattgatgatgcaagattgcttcttggaatacattactatggatttggtaattgggaa
aagattagattagatgaaaggcttggccttacgaaaaaaattgcacctgtagaacttcta
caccatgaaactttcttgccacgagctccaaatttgagagaccgtgctaacgccttgttg
gagcaagaacttgctgttcttggtgttaaacataccaataatagagttggacggaagcct
tccaagaaagagagagaacaaatgaacacctcactgttgcgagggcaggagaagaaaaaa
gcgggttctgttaaagttgatgtccaaatgagaaagaatagattccagaaaacccaaaag
gttgaacctattgcaaaagaggagggtgaaatgtccgacaatgaagaagtatatgagcag
ttcaaggaggtaaaatggatggaatggtgtcaggatgtgatggttgaagaaatgaaaact
ttgaaacgtcttcacaggttgcagacaactagtgccaatcttccaaaggaaaaggttctt
tcgaaaatacgcaactatttacagcttcttgggcgaaggatagatcaaattgtgttagaa
catgaagaggaaccgtataagcaagatagaatgactgtgcgactgtggaaatatgtctcc
actttctcccatctttctggggaaaggcttcatcaaatatattccaaacttaaaaaggag
caagaagaggctggggttggcccctctcatgtcaacgggtcagcatctgtttcattcggc
cgaaatggaaacccgatccatcaccatatggagaggcaaagaggtttaaaaaatatgact
agctaccaactgccagaatcagttagtagtaatacagggaaatctgaggcatggaaacga
agaagaagagcggaaagtgaggatcatttccaggttccacctcaaagatccacgagtagt
ggagtccagattactgatcctaactcacttggcatccttggtgctggaccatctgacaaa
cgctttgttagtgagaaaccttacaggacacaacccggtggggttcctttaagacaaagt
ttctcttcaggtataaactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (15)   

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