KEGG   Lotus japonicus: Lj3g3v0301720.1
Entry
Lj3g3v0301720.1   CDS       T04348                                 
Symbol
Lj3g3v0301720.1
Name
(Kazusa) -
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
lja  Lotus japonicus
Pathway
lja03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Lj3g3v0301720.1 (Lj3g3v0301720.1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lja01009]
    Lj3g3v0301720.1 (Lj3g3v0301720.1)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lja03019]
    Lj3g3v0301720.1 (Lj3g3v0301720.1)
   03036 Chromosome and associated proteins [BR:lja03036]
    Lj3g3v0301720.1 (Lj3g3v0301720.1)
Protein phosphatases and associated proteins [BR:lja01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     Lj3g3v0301720.1 (Lj3g3v0301720.1)
Messenger RNA biogenesis [BR:lja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     Lj3g3v0301720.1 (Lj3g3v0301720.1)
Chromosome and associated proteins [BR:lja03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     Lj3g3v0301720.1 (Lj3g3v0301720.1)
SSDB
Motif
Pfam: WD40 ComGF Me-amine-dh_H
AA seq 266 aa
MDGGADEVVAPAAPAGPPHPLDWKFSQVFGERAAGEEVQEVDIISAIEFDKSGDHLATGD
RGGRVVLFERTDAKDHGGSRRDLESMDYSIGRHPEFRYKTEFQSHEPEFDYLKSLEIEEK
INKIRWCQTANSALFLLSTNDKTIKFWKVQEKKVKKIAEMNVDPSKNMGNGCIASSSNSN
SPRPSLSNGGSPDRSCNYPSNDFSFPPGGIPSLRLPVVSNHESSLVARCRRVYAHAHDYH
INSISNNSDGETFISADDLRINLWNL
NT seq 798 nt   +upstreamnt  +downstreamnt
atggacggtggtgccgatgaggttgtcgcaccagcagctccggcgggtccaccgcaccct
ctcgactggaaattctcccaggttttcggtgaacgtgcggctggggaagaggttcaggaa
gtggacataatttctgctattgaatttgacaagtctggcgatcatcttgctactggtgat
cgtggtggtcgagtggttctctttgagaggacagatgcaaaagatcatggtggatcaaga
agggatttggagagtatggactattctattggtaggcatcctgaattccgttacaaaaca
gagtttcagagtcatgagcctgagtttgactatcttaagagcttggaaattgaagagaaa
atcaacaaaatcagatggtgccaaacagctaatagtgcccttttccttctctctacaaat
gataaaaccatcaaattttggaaggttcaagaaaagaaggtcaagaaaattgctgaaatg
aatgttgatccttcaaaaaatatgggaaatggctgtattgctagttcaagtaattcaaat
agtcctagaccatctctttcgaatggtggatctccagatagatcatgcaattatccaagc
aatgacttctcatttccaccagggggcataccatcactgagattacccgtggtaagtaac
catgagagcagcttggtggctcgatgccgtagagtatatgcccatgctcatgactatcat
atcaattctatttcaaataacagcgatggtgaaactttcatatcagccgatgatttgcga
ataaatctctggaacctg

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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