KEGG   Lotus japonicus: Lj4g3v1604510.1
Entry
Lj4g3v1604510.1   CDS       T04348                                 
Symbol
Lj4g3v1604510.1
Name
(Kazusa) -
  KO
K01164  ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
Organism
lja  Lotus japonicus
Pathway
lja03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Lj4g3v1604510.1 (Lj4g3v1604510.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lja03009]
    Lj4g3v1604510.1 (Lj4g3v1604510.1)
   03016 Transfer RNA biogenesis [BR:lja03016]
    Lj4g3v1604510.1 (Lj4g3v1604510.1)
   03029 Mitochondrial biogenesis [BR:lja03029]
    Lj4g3v1604510.1 (Lj4g3v1604510.1)
Enzymes [BR:lja01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     Lj4g3v1604510.1 (Lj4g3v1604510.1)
Ribosome biogenesis [BR:lja03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     Lj4g3v1604510.1 (Lj4g3v1604510.1)
Transfer RNA biogenesis [BR:lja03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    Lj4g3v1604510.1 (Lj4g3v1604510.1)
Mitochondrial biogenesis [BR:lja03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    Lj4g3v1604510.1 (Lj4g3v1604510.1)
SSDB
Motif
Pfam: POP1_N
AA seq 528 aa
MLTEGTRKPQGSVPIPPRKINVQKYAKSRAPELLSLQSIVENRLNNNYSSQRNKRRRTTA
FDSQIARKGGNRKRQKLGTVDKAHDESVLEKDQLKKLPRHIRRRYELKMNPENGFCTSGD
GTKRLRTHVWHAKRFAMTKLWGYNLPLGFQGRGKGSRAVLKRFKEGVLLHDSSYYTAVQL
EGPEDSLVSVLRMVLLPSLETETPGNHDFSVLSGITYGTAMLYQVGAPVSQPIAPVTYIW
RPTFPQNTSTELDGRNHHTSLSQHDINDNLSNHDADLCEKSDVMKCGSSFRHIWVWIHAS
AFEEGYDSLKFACQKEMEKSGVLINCLSLEGQLGKLELMGSQTFNLLQKILHPVSSISEN
HWQLKKHVAIEEDSVSPSIKSSILKSEEHFSSHAMLSLNVTDPRELLGKRTITPTEPIST
EARSDAQETNNNELANLGGKFENNKGLSSLSWSKLVDSQSNVDDLWDASTTGLRPPVEDS
VLAKEKHCERMVNFCLDDIESGEANSSTKMVHYTSPKLGQSLLDSSHL
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgcttactgaaggaaccagaaagcctcaaggttcagtacctataccacctcgcaaaatc
aatgtgcagaaatatgctaaatcacgtgccccggagctcctgagcctgcaatctatcgta
gaaaatagattaaacaacaactatagctctcaaaggaacaagagaagaagaacaactgca
tttgatagtcaaatcgcaagaaaggggggcaacagaaagaggcagaaactgggaacagtt
gataaagcccatgatgaatcagttttggagaaggaccagttaaagaagcttcctcggcat
atacgacggagatatgaacttaaaatgaacccagagaatggtttttgcacttctggggat
ggaaccaagagactgagaactcatgtttggcatgcaaagcgtttcgccatgacaaagctg
tggggttacaaccttccactgggttttcaaggaagagggaaaggttcaagggcagtcttg
aaaagattcaaagaaggtgtgcttttgcatgattctagctattatactgctgtccaattg
gagggtccagaggattcgttagtttcagtattaagaatggtactattgccctctctggaa
acagaaacgcctggaaatcatgatttttctgttctttctggtataacctatggaactgca
atgctttatcaagttggagcaccggtttctcagccaattgctcctgtgacctatatatgg
cgacctactttccctcaaaatacgagtacagagctagatggcagaaatcatcatacttct
ttaagtcaacatgatatcaatgataacttaagtaatcatgatgctgatttatgtgaaaaa
tcagatgtgatgaagtgtggttcttcatttagacacatttgggtgtggatacatgcttct
gcatttgaagaaggatatgatagtctaaaatttgcctgtcagaaagagatggaaaagagc
ggcgtcctaattaattgcttgtcacttgagggccagcttggaaaattagaattgatggga
tcacagacatttaatcttcttcagaagatattgcatcctgtcagcagtatttcagagaat
cattggcagttaaagaaacatgtggctatagaagaagactctgtttctccgagtattaag
tcatccatattgaaaagtgaggagcatttttcttctcatgcgatgttatctcttaatgtg
acggatcctcgagaacttctggggaaaaggactattactccaacagaaccaatttcaact
gaagcacggagtgatgcacaagaaactaataacaatgagcttgcgaatttaggtggaaag
tttgagaacaataaaggcttatcttcattatcatggtcaaaacttgtagacagccagtct
aatgtcgatgatctatgggatgcttccaccacagggttaaggcccccagtggaagacagt
gtccttgctaaagagaaacactgtgaacgcatggttaatttctgtcttgatgatatagag
tctggggaggcgaactcctcaaccaagatggtccattatacttcccctaagttgggtcaa
agccttctggattcctctcatctctaatgg

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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