KEGG   Lactobacillus johnsonii DPC 6026: LJP_0448
Entry
LJP_0448          CDS       T01960                                 
Name
(GenBank) 60 kDa chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
ljh  Lactobacillus johnsonii DPC 6026
Pathway
ljh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ljh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LJP_0448
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ljh03019]
    LJP_0448
   03110 Chaperones and folding catalysts [BR:ljh03110]
    LJP_0448
   03029 Mitochondrial biogenesis [BR:ljh03029]
    LJP_0448
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ljh04147]
    LJP_0448
Enzymes [BR:ljh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     LJP_0448
Messenger RNA biogenesis [BR:ljh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     LJP_0448
Chaperones and folding catalysts [BR:ljh03110]
 Heat shock proteins
  HSP60 / Chaperonin
   LJP_0448
Mitochondrial biogenesis [BR:ljh03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    LJP_0448
Exosome [BR:ljh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   LJP_0448
  Exosomal proteins of other body fluids (saliva and urine)
   LJP_0448
  Exosomal proteins of breast cancer cells
   LJP_0448
  Exosomal proteins of colorectal cancer cells
   LJP_0448
  Exosomal proteins of bladder cancer cells
   LJP_0448
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AEB92782
Position
490210..491841
AA seq 543 aa
MAKEIKFSENARHSLLKGVDKLADTVKTTLGPKGRNVVLEKSYGAPDITNDGVTIAKSIE
LENHFENMGAKLVSEAAQKTNDIAGDGTTTATVLTQAIVREGMKNVTAGANPVGIRRGIE
TATKAAVDELHKISHKVSTKDEIAQVASVSSASTEVGNLIADAMEKVGHDGVITIEESKG
IDTELSVVEGMQFDRGYLSQYMVTDNDKMEADLDNPYILITDKKISNIQDILPLLQEIVQ
QGKSLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVIS
SDLGLELKDTKIDQLGKAGKVTVTKDSTTIVEGAGSKEAIAERVDQIKKQIADTTSDFDR
EKLQERLAKLAGGVAVIKVGAATETELKERKYRIEDALNATRAAVEEGYVAGGGTALVDV
MKSIQGTVKGDSEDAETGVKIVMKALGAPVRQIAENAGKDGAVILDHLEHEDPEVGYNAA
TNKWENMVKAGIIDPTKVTRSALQNAASIAALLLTTEAVVADAPEDDKNQAPAAPNPGMG
MGM
NT seq 1632 nt   +upstreamnt  +downstreamnt
atggctaaagagattaaattttctgaaaatgcaagacactcattattaaaaggtgttgat
aaattagcagatactgttaagacaactttaggacctaagggtagaaatgttgttttggaa
aagagttatggtgctcctgacattactaacgatggtgttactatcgccaagagtattgaa
ttagaaaaccattttgaaaacatgggtgcaaagcttgtttctgaagctgcacaaaagact
aacgacattgctggtgacggtactactactgctactgttttaactcaagcaatcgttcgt
gaaggtatgaagaacgttactgctggtgcaaaccctgttggtattcgtcgcggtattgaa
actgctactaaggcagctgttgacgaattacacaagattagccacaaggtaagtactaag
gacgaaattgctcaagttgcttcggtttcatcagcttcaactgaagttggtaacttaatc
gctgacgcaatggaaaaagttggtcacgatggtgttattactattgaagaatcaaagggt
attgatactgaactttcagtagttgaaggtatgcaattcgatcgtggttacttatcacaa
tacatggtaactgacaacgacaagatggaagcagacttggacaacccttacattttgatt
actgacaagaagatttctaacattcaagatatcttgccattattacaagaaattgttcaa
caaggtaagagtttattaatcattgctgatgatgttgatggtgaagctcttccaactctt
gttttgaacaagatccgtggtactttcaacgttgttgctgttaaggctcctggctttggt
gaccgtcgtaaggcaatgcttgaagatatcgctatcttaactggtggtactgtaatttct
tcagacttaggtcttgaattaaaggacactaagattgatcaattaggtaaggctggcaag
gttactgtaaccaaggattcaactactattgttgaaggtgctggttctaaggaagctatt
gcagaacgtgtagatcaaatcaagaagcaaattgctgacactacttcagactttgaccgt
gaaaagttacaagaacgtcttgctaagcttgctggtggtgttgctgtcatcaaagttggt
gctgctactgaaactgaattaaaggaaagaaagtacagaatcgaagacgctttgaacgca
acccgtgccgctgttgaagaaggttacgttgctggtggtggtactgcattagttgatgtt
atgaagtccatccaaggtactgttaagggtgacagcgaagatgcagaaactggtgttaag
attgttatgaaagctttaggcgctcctgtacgtcaaattgctgaaaacgctggtaaagat
ggtgctgttatcttagaccacttagaacatgaagacccagaagttggttacaatgctgca
actaacaagtgggaaaacatggttaaggctggtattatcgacccaactaaggtaactcgt
tcagcacttcaaaatgctgcttcaattgctgccttgttattaactactgaagctgttgtt
gctgacgctccagaagatgacaagaaccaagctcctgcagctccaaacccaggtatgggt
atgggaatgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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