KEGG   Lactobacillus johnsonii DPC 6026: LJP_1266
Entry
LJP_1266          CDS       T01960                                 
Name
(GenBank) DNA-directed DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ljh  Lactobacillus johnsonii DPC 6026
Pathway
ljh03030  DNA replication
ljh03430  Mismatch repair
ljh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ljh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LJP_1266
   03430 Mismatch repair
    LJP_1266
   03440 Homologous recombination
    LJP_1266
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ljh03032]
    LJP_1266
   03400 DNA repair and recombination proteins [BR:ljh03400]
    LJP_1266
Enzymes [BR:ljh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LJP_1266
DNA replication proteins [BR:ljh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LJP_1266
DNA repair and recombination proteins [BR:ljh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LJP_1266
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C DNA_pol_B_exo2
Other DBs
NCBI-ProteinID: AEB93588
Position
1359333..1359866
AA seq 177 aa
MNFTAMDFETANSHPESACSLALVMVRNNEIVDRFYTVINPQMPFDGRNIRIHGITAEDV
KNAPTMAEVWPKIKKLYQPGMLVAAHNARFDCRVMEKSLARYNIPAPHYFAIDTLATSKA
FEPYLPNHKLDTVSEALNINLWHHHNALSDSEACAGILIEENKRVGDDPIKKMVKPI
NT seq 534 nt   +upstreamnt  +downstreamnt
atgaactttactgcaatggattttgaaacggcaaacagtcatccggaaagtgcctgttct
cttgctttagttatggttagaaataatgaaattgtggatcgtttttatacagttatcaat
ccacaaatgccttttgatggaagaaatataagaattcatggcattacagctgaagacgta
aaaaacgctccaacaatggctgaagtctggccaaaaataaaaaaattatatcaaccagga
atgttagtagctgcccataacgctcgctttgattgccgcgtaatggagaaatcactggct
cgctataatattccggcaccccattactttgcaattgatactttagcaactagtaaagcc
tttgaaccctatcttcctaatcacaaactagatacagtctcagaagctttaaatatcaat
ttatggcaccaccataatgctttaagcgatagcgaagcttgtgcaggtattttaattgag
gaaaataaacgtgttggagatgatccaatcaaaaaaatggttaagcctatctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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