KEGG   Lactobacillus johnsonii DPC 6026: LJP_1392cHelp
Entry
LJP_1392c         CDS       T01960                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ljh  Lactobacillus johnsonii DPC 6026
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ljh00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    LJP_1392c
Enzymes [BR:ljh01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     LJP_1392c
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LJP_1392c
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1492640..1493470)
Genome map
AA seq 276 aa AA seqDB search
MPEMPEVETVKRTLTPLVKGKTIAKIIIWYPKIIVNNPDEFVEKLTNKKILKIDRYGKYL
LFRFSDDLTMVSHLRMEGKYHLVTPDHPKGKHEHVEFVFTDGTALRYADVRKFGRMHLVE
TGTEKQTTGIRHLGPEPNTEEFSVEYFINALSRKKKNIKNTLLDQTVVCGLGNIYVDEVL
WQSKIHPLSSAKSIPADKIVDLYHNINHTITVATKERGTTVHTYLDANGDIGGYQNMLQV
YGHAGEECNNCGTILEKIKVNGRGTTFCPHCQVLYK
NT seq 831 nt NT seq  +upstreamnt  +downstreamnt
atgccagaaatgccagaagtagagacagttaaaagaacgctaactcctttagttaaagga
aaaacaattgctaaaattattatttggtatccaaagattatagttaataatcctgacgaa
ttcgttgaaaaattaacgaataaaaaaattttgaaaattgatcgttatggcaagtattta
ctatttagatttagcgatgacctgactatggtttcccatttacgaatggaaggaaaatat
catttagtgactcctgatcatcctaaaggaaagcacgagcatgtggaatttgtttttact
gatggaactgctctgcgctatgctgacgtacgtaaattcggaagaatgcatttagtagaa
actggaacagagaagcagacgaccggaattcggcaccttggccctgaaccaaacactgaa
gagtttagtgtagaatactttattaatgctctaagtcgaaagaagaagaatattaagaat
actcttttagatcaaaccgtagtttgtggtttaggaaatatttatgttgatgaagtattg
tggcagagtaaaattcatcccttaagtagtgcgaagtcaattcctgctgacaagatagta
gatttatatcacaatataaatcatacgattactgttgcaactaaagagcgcggtactacg
gtacatacttatttggatgctaatggtgatataggtggttaccaaaatatgctccaggtt
tacggtcatgcgggtgaagagtgtaataattgtggcactattctagagaaaattaaagta
aatggacgcggaactactttctgtccgcattgtcaggtgctatacaaatga

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