KEGG   Lactobacillus johnsonii N6.2: T285_07040Help
Entry
T285_07040        CDS       T02941                                 

Definition
5-hydroxymethyluracil DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ljn  Lactobacillus johnsonii N6.2
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ljn00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    T285_07040
Enzymes [BR:ljn01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     T285_07040
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     T285_07040
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1447261..1448091)
Genome map
AA seq 276 aa AA seqDB search
MPEMPEVETVRRTLTPLVKGKTIAKIIIWYPKIIVNNPDEFVEKLTNKKILKIDRYGKYL
LFRFSDDLTMVSHLRMEGKYHLVTPDHPKGKHEHVEFVFTDGTALRYADVRKFGRMHLVE
TGTEKQTTGIRHLGPEPNTEEFSVEYFINALSRKKKNIKNTLLDQTVVCGLGNIYVDEVL
WQSKIHPLSSAKSIPADKIVDLYHNINHTITIATKERGTTVHTYLDANGDIGGYQNMLQV
YGHAGEECNNCGTILEKIKVNGRGTTFCTHCQVLYK
NT seq 831 nt NT seq  +upstreamnt  +downstreamnt
atgccagaaatgccagaagtagagacagttagaagaacgctaactcctttagttaaagga
aagacaattgctaaaattattatttggtatccaaagattatagttaataatcctgacgaa
ttcgttgaaaaattaacgaataaaaaaattttgaaaattgatcgttatggcaagtattta
ctatttagatttagcgatgacctgactatggtttcccatttacgaatggaaggaaaatat
catttagtgactcctgatcatcctaaaggaaagcacgagcatgtggaatttgtttttact
gatggaactgctctgcgctatgctgatgtacgtaaattcggaagaatgcatctagtagaa
actggaacagagaagcagacaactggaattcggcaccttggccctgaaccaaatacggaa
gagtttagtgtagaatactttattaatgctctaagtcgaaagaagaaaaatattaagaat
actcttttagatcaaaccgtagtttgcggtttaggaaatatttatgttgatgaagtgttg
tggcagagtaaaattcatcccttaagtagtgcgaagtcaattcctgctgacaaaatagta
gatttatatcacaatataaatcatacgattactattgcaactaaagagcgtggtactacg
gtacatacttatttggacgctaatggtgatataggtggttaccaaaatatgctccaggtt
tacggtcatgcgggtgaagagtgtaataattgcggcactattctagagaaaattaaagta
aatggacgcggcactactttctgtacgcattgtcaggtgttatacaaatga

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