KEGG   Lactobacillus johnsonii NCC 533: LJ1650Help
Entry
LJ1650            CDS       T00158                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ljo  Lactobacillus johnsonii NCC 533
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ljo00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    LJ1650
Enzymes [BR:ljo01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     LJ1650
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LJ1650
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1524460..1525290)
Genome map
AA seq 276 aa AA seqDB search
MPEMPEVETVRRTLTPLVKGKTIAKIIIWYPKIIVNNPDEFVEKLTNKKILKIDRYGKYL
LFRFSDDLTMVSHLRMEGKYHLVTPDHPKGKHEHVEFVFTDGTALRYADVRKFGRMHLVE
TGTEKQTTGIRHLGPEPNTEEFSVEYFINALSRKKKNIKNTLLDQTVVCGLGNIYVDEVL
WQSKIHPLSSAKSIPADKIVDLYHNINHTITVATKERGTTVHTYLDANGDIGGYQNMLQV
YGHAGEECNNCGTILEKIKVNGRGTTFCPHCQVLYK
NT seq 831 nt NT seq  +upstreamnt  +downstreamnt
atgccagaaatgccagaagtagagacagttagaagaacgctaactcctttagttaaagga
aaaacaattgctaaaattattatttggtatccaaagattatagttaataatcctgacgaa
ttcgttgaaaaattaacgaataaaaaaattttgaaaattgatcgttatggcaagtattta
ctatttagatttagcgatgacctgactatggtttcccatttacgaatggaaggaaaatat
catttagtgactcctgatcatcctaaaggaaagcacgagcatgtggaatttgtttttact
gatggaactgctctgcgctatgctgacgtacgtaaattcggaagaatgcatctagtagaa
actggaacagagaagcagacgaccggaattcggcaccttggccctgaaccaaacactgaa
gagtttagtgtagaatactttattaatgctctaagtcgaaagaagaagaatattaagaat
actcttttagatcaaaccgtagtttgtggtttaggaaatatttatgttgatgaagtattg
tggcagagtaaaattcatcccttaagtagtgcgaagtcaattcctgctgacaagatagta
gatttatatcacaatataaatcatacgattactgttgcaactaaagagcgcggtactacg
gtacatacttatttggatgctaatggtgatataggtggttaccaaaatatgctccaggtt
tacggtcatgcgggtgaagagtgtaataattgtggcactattctagagaaaattaaagta
aatggacgcggaactactttctgtccgcattgtcaggtgctatacaaatga

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