KEGG   Levilactobacillus koreensis: ABN16_09320
Entry
ABN16_09320       CDS       T03995                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
lko  Levilactobacillus koreensis
Pathway
lko03420  Nucleotide excision repair
lko03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lko00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ABN16_09320
   03430 Mismatch repair
    ABN16_09320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lko03400]
    ABN16_09320
Enzymes [BR:lko01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ABN16_09320
DNA repair and recombination proteins [BR:lko03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ABN16_09320
   MMR (mismatch excision repair)
    Other MMR factors
     ABN16_09320
SSDB
Motif
Pfam: UvrD-helicase UvrD_C_2 UvrD_C AAA_19 Viral_helicase1 SLFN-g3_helicase DUF4351 DEAD AAA_16 AAA_30 PhoH NACHT Catalase_C YflT
Other DBs
NCBI-ProteinID: AKP65181
Position
2086759..2089053
AA seq 764 aa
MPDSIKAHEQKHLDAVVTKIKIAEKDAKQRIDVAEDDEAGIRKNFVNDLRIKTDSYEGLL
ETALSVRQQQQLLAERQNSWQHATTELSTLQRLEKKAYFARIDFQEGLTAKTETIYIGLG
SFSDTPDHFLIYDWRAPISSIYYDGELGNVSYQTPDGEQTVDVKLKRQFQIEDGTIVTLY
DTDQTVTDQMLLSALSEHSDTKMKSIVTTIQKEQNQIIRDTKSDLLFVQGAAGSGKTAAI
LQRVAFLLYRYRGHLTAGQVMLFSPNQLFNDYIDQVLPELGEHNMVQMTYYQYAGRRLPK
IDVETLAQRFGETNTPAQKKINQLKGSLAFFNAVTAYADQLESRDMVFRNIKFQGKVFID
REKIQEIYYSFNRNYHLGNRLQATKEALIRILNRRITSEMKTKWVEETIQDMSKEQLDTL
YGEEPREFDSSEKEMQFLSRKVVMQAFDPIRKAIVRARFLSINNQYVHMLRNMPNRIDLA
HEGISVADWNASVDESIGKLKDHRMQLVDTTPYLYLYDKMTGKGGERDMRYVFMDEIQDY
NAFQLAFLKFSFPRARFTMLGDLNQAIFTKENSRTLLQELSTMFDPDKTRVIQLTQSYRS
TQQVTDFTKHILKNGEAVTAFAREGELPTMTLAADEAAGLKRVIAQIKQNEEEDETTAII
GKDLADCRDLTEKLKAAGVAVTLIQSENQRLAPGTIVVPSFLAKGLEFDGVIVWQASASR
YAAEDERQLLYTICSRAMHRLSIVGIGEFSPLLSDVSSDEYEMI
NT seq 2295 nt   +upstreamnt  +downstreamnt
ttgccagattcaattaaggcccacgaacaaaaacacttagatgcggtagttacgaagatc
aagatcgcagaaaaggacgctaaacagcgaatcgacgtggctgaggatgacgaagccggg
attcgcaagaactttgtcaacgacttacgaatcaaaacagatagttatgagggcttgctg
gaaacggcgctgtcggtgcggcaacaacaacaactgttggccgaacggcagaatagttgg
caacacgcgacgacggagttaagcacgctccaacggttggagaagaaggcttactttgcc
cggatcgattttcaagaaggtctgaccgcgaagactgagaccatttacattgggttaggg
tcattttctgatacgcccgaccacttcttgatctatgactggcgggcgcccatctcgagt
atttattacgacggggaattggggaatgtgagctaccagacgccggatggcgaacaaacc
gtcgacgtgaagctcaaacgtcaatttcaaatcgaagacgggaccatcgtgaccctgtac
gacaccgaccaaacggtgacggatcagatgttgctgtcagcattgagcgagcactccgat
accaagatgaagagtatcgtcacgaccattcaaaaggaacaaaaccaaattatccgggat
accaaatccgacctgctattcgtgcagggggcagcgggatctgggaagacggccgctatt
ttgcaacgggtcgccttcctgctgtaccgctaccggggtcatttaacggcggggcaggtc
atgctgttctcacctaaccaattatttaatgactatattgaccaagtgttgcctgaatta
ggggaacacaacatggttcagatgacgtactaccagtacgcgggacggcggttgccgaag
atcgacgtggaaacgttggcgcagcgctttggcgaaaccaatacaccggctcaaaagaag
atcaatcagctcaagggaagtctcgcgttctttaacgccgtaacggcctacgcggaccaa
ctggagagtcgcgacatggtcttcagaaacatcaagttccagggtaaggtctttattgat
agagaaaaaattcaagaaatttactacagcttcaaccgcaactatcacttgggtaaccgc
ctgcaggccacgaaggaagccttgattcgtattttgaatcggcgaattacgagcgaaatg
aagaccaagtgggttgaggaaactattcaggacatgagtaaggaacagttggataccttg
tatggcgaggaaccgcgggaatttgactcctccgaaaaggaaatgcaattcctgtcacgg
aaggtcgtcatgcaagcgtttgatccgattcggaaggccatcgttcgggcacggttcttg
agtatcaataatcaatacgttcacatgctacgaaacatgccgaaccgaattgatttagcc
catgaaggaatctccgtagctgattggaatgccagcgttgatgaatccattggcaagttg
aaggatcatcgcatgcagttggttgatacgacgccgtacctgtacttgtacgacaagatg
acgggtaagggtggcgaacgggacatgcgctacgtcttcatggacgaaattcaagactac
aatgcgttccaactggccttcctgaagtttagtttcccacgggcacgctttaccatgctg
ggagacctgaaccaggccatcttcaccaaggagaatagtcggacgttgctgcaggaactc
agtacgatgtttgaccccgacaagacgcgggtcattcagctgacgcagtcgtaccggtcg
acgcagcaggtgacggatttcaccaagcatatcttgaaaaatggtgaagcggtcacggcg
ttcgcacgggaaggtgaactcccaaccatgacgctggcggcggatgaagcggctggacta
aagcgagtcatcgcccagatcaagcaaaatgaagaagaggatgagacgaccgccattatt
gggaaggacttggcggattgccgcgacctgaccgaaaagctgaaggcagcgggcgtagcg
gtcacgttgattcagtccgaaaaccaacggctggcaccaggaaccattgtggtaccgtcg
ttcttggccaagggattggaattcgacggtgtcatcgtttggcaggcttcggctagccgt
tacgcggcggaagatgaacggcaattgctgtacaccatctgctcgcgagccatgcaccga
ctgagcatcgtcggcattggtgagttctcgccattactgagcgatgtgtctagtgatgag
tatgaaatgatttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (24)   

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