KEGG   Lactococcus lactis subsp. cremoris SK11: LACR_0399Help
Entry
LACR_0399         CDS       T00420                                 

Definition
(GenBank) Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase (EC:3.2.2.23 4.2.99.18)
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
llc  Lactococcus lactis subsp. cremoris SK11
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:llc00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    LACR_0399
Enzymes [BR:llc01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     LACR_0399
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LACR_0399
DNA repair and recombination proteins [BR:llc03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     LACR_0399
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
Structure
PDB: 

Jmol
Position
371279..372097
Genome map
AA seq 272 aa AA seqDB search
MPELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKIIQGILRRGKYL
IFEIGDDFRLISHLRMEGKYRLATLDAPREKHDHLTMKFSDGQLIYADVRKFGTWELIST
DQVIPYFLNKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGNIYVDEVLW
LAKIHPEKEANQLTESSIHLLHDSIIEILQKAIKLGGSSIRTYSALGSTGKMQNELQVYG
KTGEKCSRCGAEIQKIKVAGRGTHFCPVCQQK
NT seq 819 nt NT seq  +upstreamnt  +downstreamnt
atgccagaattaccagaagttgaaaccgttagaagagaacttgaaaaaagaattgttgga
caaaaaattatatctatagaagccacttatccaagaatggtcttaactggttttgagcaa
ttgaaaaaagaattgacaggaaaaatcattcagggcatcttgcggcgagggaaatattta
atttttgaaattggagatgactttcgcttgatttctcatttacgaatggaagggaaatat
cgcttagcaacacttgatgcaccaagagaaaagcatgaccatttgacaatgaaattttct
gatgggcagttaatctatgccgatgtaaggaaatttggaacttgggaattgatttctact
gaccaagtgattccctattttctgaacaaaaaaattggaccagaaccgacctatgaagat
tttgatgaaaagctttttcgagagaaattaagaaaatcaacaaagaaaataaaaccttat
ttacttgagcaaacccttgttgctgggcttggcaatatttatgttgatgaagtgctctgg
ttagcaaaaattcatccagaaaaagaggctaatcagctgacagaaagttccatccacctt
ttgcacgactcaattattgaaattttgcaaaaagcgattaagcttggtggttcaagtatt
agaacttatagtgccttaggatcaactggtaaaatgcaaaatgagttgcaagtttatggt
aaaacgggtgaaaaatgttcccgttgtggtgcagagattcaaaaaataaaagttgctggt
cgaggcactcatttttgcccagtttgtcagcaaaaataa

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