KEGG T02882: P620

Lactococcus lactis subsp. lactis KLDS 4.0325: P620_04915

Entry

P620_04915        CDS       T02882

Symbol

gyrB

Name

(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

lld Lactococcus lactis subsp. lactis KLDS 4.0325

Brite

KEGG Orthology (KO) [BR:lld00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lld03032]
    P620_04915 (gyrB)
   03400 DNA repair and recombination proteins [BR:lld03400]
    P620_04915 (gyrB)
Enzymes [BR:lld01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     P620_04915 (gyrB)
DNA replication proteins [BR:lld03032]
Prokaryotic type
  DNA Topoisomerases
   P620_04915 (gyrB)
DNA repair and recombination proteins [BR:lld03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      P620_04915 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3

Other DBs

NCBI-ProteinID:

AGY44053

Position

930092..932047

AA seq 651 aa
MNEENKNLEMLADEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEA
LAGFASHIEVFIEPDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKV
SGGLHGVGSSVVNALSTVLDVTVHKDGQKYYQEYHRGLVGDDLKIIGETDRRGTTVHFVP
DPEIFTETVEFDFDKLATRVRELAFLNRGLRISLTDKREGNEKNEVHFHYEGGIQSYVEY
LNENKTVIFEPAIFTEGEMDGIAVEVAMQYTDTYHSVVMSFANNINTHEGGTHEQGFRTA
LTRVINNYAKQNKILKENEDNLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVTGI
VNKLFAEALTTFMLENPQVARKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLA
DCSSNNPEQTELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKATMDKILANEEIR
SLFTAMGTGFGADYDLSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVYI
AQPPIYGIKVGSETKEYIQPGENQEKDLQEALARWAQGRTKPTVQRYKGLGEMDDHQLWD
TTMDPEHRLMARVSVEDAAEADKIFDMLMGDRVEPRREFIENNAQYSTIDA

NT seq 1956 nt +upstreamnt +downstreamnt
ttgaacgaagaaaataaaaatttagaaatgcttgcagacgaatatgacgccagtcaaatt
caagtacttgaaggtcttgaagcagtacgtatgcgtccagggatgtatattggttcaacc
tcaaaagaagggttgcaccatttagtctgggaaattgttgacaattcaattgatgaagca
cttgcaggatttgcaagccatattgaggtttttattgagcctgataattcaattactgtt
gttgatgatggacgtggaattccggttgatattcaagaaaaaacgggtcgtccagccgtg
gaaacagtcttcacagtgttgcatgctggaggtaaatttggtggaggcggctataaagtt
tctggtggattgcacggtgttggttcatctgttgttaatgctttgtcaacagtactagat
gttactgttcataaagatggccaaaaatattatcaagaatatcatcgtggtctcgttgga
gatgatttaaaaattattggtgaaactgaccgtagagggacaactgttcactttgtacca
gacccagaaatttttacagaaactgttgaatttgattttgataagcttgcaacacgtgtt
cgtgagttagcctttttgaatcgcggtcttcgcatttccttaacagacaaacgtgaagga
aatgaaaaaaatgaagttcacttccattatgaaggtggaattcagtcttatgttgaatat
ttaaatgaaaataagacagtcatttttgaaccagcaatttttactgaaggtgaaatggat
ggaattgctgttgaagtagcaatgcaatatactgatacttatcattcagtagtgatgtcc
tttgctaataacatcaacactcatgaaggtggaacacatgagcaaggttttagaacagcc
cttactcgtgttattaataattacgcaaaacaaaataaaattcttaaagaaaacgaagat
aatttaactggggatgatgtccgcgaaggattgacagcagttatttcggttaagcatcct
aatccacaatttgaagggcaaaccaaaacaaaacttgggaactcagaagtaacaggaatt
gttaacaaactctttgcggaagctttgacaacatttatgttagaaaatccacaagttgct
cgtaaaatcgttgaaaaagggattttggcaagtaaagcaaggattgcagcaaaacgtgcg
cgtgaagtgacacgtaaaaaatcagggcttgaaatttccaaccttcctggtaaattagct
gactgttcatcaaataatccagaacaaacagaattattcatcgtcgaaggagattcggct
ggaggttcggctaaatcaggacgtaatcgtgaattccaagcaattttacctattcgtggt
aagattttgaatgtggaaaaagcaacgatggataaaattttggccaatgaagaaattcgt
tctctattcactgcaatgggaactggttttggagcagattatgatttgtcgaaagcacgt
tatcacaaacttgttatcatgaccgatgccgatgtcgacggagcacacatccgtacgctt
ttactaacactcttctaccgttatatgcgcccagttgttgaagcagggtatgtttatatt
gctcagccaccaatttacggtatcaaagttggttcagaaacaaaagaatacattcaacca
ggtgaaaatcaagaaaaagatttacaagaagctttagcacgttgggcacaaggaagaaca
aagcctactgtacaacgttataaaggtttaggggaaatggatgaccatcaactttgggat
acaacaatggatcctgaacaccgtttaatggcacgtgtatctgttgaagacgcagcagaa
gctgacaaaatctttgatatgctcatgggagacagagttgaacctcgtcgtgaatttatt
gaaaataatgctcagtactcgacaattgatgcataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

Download RDF

DBGET integrated database retrieval system