KEGG   Lactococcus lactis subsp. lactis KF147: LLKF_0405
Entry
LLKF_0405         CDS       T01141                                 
Symbol
rheA
Name
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
llk  Lactococcus lactis subsp. lactis KF147
Pathway
llk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:llk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LLKF_0405 (rheA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:llk03019]
    LLKF_0405 (rheA)
   03009 Ribosome biogenesis [BR:llk03009]
    LLKF_0405 (rheA)
Enzymes [BR:llk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     LLKF_0405 (rheA)
Messenger RNA biogenesis [BR:llk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     LLKF_0405 (rheA)
Ribosome biogenesis [BR:llk03009]
 Prokaryotic type
  rRNA helicases
   LLKF_0405 (rheA)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Helicase_RecD
Other DBs
NCBI-ProteinID: ADA64175
UniProt: D2BNN6
Position
399981..401624
AA seq 547 aa
MKFSELGLSEGIVNTLTEIGYEQPTPIQEQTIKLALEGRDVLGQAQTGTGKTAAFGLPTI
EKIDASNPAIQALVIAPTRELAVQGQEELFRFGKSKGLKVRTVFGGSSIEKQIKGLKAGA
HIVVGTPGRLVDLIKRKAIKLDQLETLILDEADEMLNMGFLEDIHFIIEKTPEARQTLLF
SATMPNDIKKIGVKFMKNPEHIKIAAKEMTADRIDQYFVKTKEFEKFDVLTRLLDVERPE
LAIVFGRTKRRVDELIRGLKLRGYRAEGMHGDLDQNKRLAVLRDFKAGHIDVLVATDVAA
RGLDVSGVTHVYNYDITQDQESYVHRIGRTGRAGKSGRSVTFVSYNEMGYLRAIENMTKK
PMKGLKPPTKEEAYQASLSVAMDDVLRDLSDDSAKAKLAKFDKQAASLLEKFDAKELVAL
LLQGRVKDPDNQEEVKITAERPLPYNGEGKGFKKKGKGGGGRYKGRGNGDRDGNRGGYRG
NRDGKDGERGGDRKRNWKDRDDNRGGYRGKRDDRRFDDRKQGEKTPRKRTTGTEKSAGFV
MRSRGDK
NT seq 1644 nt   +upstreamnt  +downstreamnt
atgaaatttagtgaactcggcctgtcagaaggaatcgtaaatacacttacagagattggg
tatgaacaaccaacaccaatccaagaacaaacaattaaacttgcacttgaagggcgtgac
gttctaggtcaagcgcaaacaggaactggtaaaacagcagcatttggtcttccaacaatt
gaaaaaattgatgcttctaatccagctattcaagcactcgttattgctccaacccgcgaa
cttgcagttcaaggacaagaagaacttttccgttttggtaaatcaaaagggcttaaagtt
cgtactgtttttggtggttcaagtattgaaaaacaaattaaaggtcttaaagctggtgca
catattgttgtgggaacaccaggacgtttggttgacttgattaaacgtaaagcaattaaa
ttggatcaacttgaaactttgattcttgatgaagctgatgaaatgttgaacatgggattc
ttggaagacattcatttcatcattgaaaaaacaccagaagctcgtcaaacattgcttttc
tcagcaacaatgccaaatgacatcaaaaaaattggtgtgaaattcatgaagaatcctgaa
cacatcaaaattgcagccaaagaaatgactgctgaccgtattgatcaatattttgtaaaa
acaaaagaatttgaaaaatttgatgttttgactcgtttgcttgatgttgaacgtccagaa
cttgcaattgttttcggtcgtacaaaacgtcgtgttgatgaattgattcgtggtcttaaa
ttgcgcggttaccgtgctgaaggaatgcacggagatttggaccaaaataaacgtttggct
gttttgcgtgatttcaaagcaggacatattgacgttttggttgcaactgacgttgctgct
cgtggacttgacgtgtcaggagttactcacgtttataactacgatattactcaagaccaa
gaaagctatgttcaccgtatcggtcgtaccggccgtgctggtaaatcaggacgttcagta
acatttgtttcatacaatgaaatgggttatcttcgtgccattgaaaatatgactaaaaag
ccaatgaaaggcttgaaaccacctacaaaagaagaagcttaccaagcgtcactctcagta
gctatggatgatgtgcttcgtgatttgtctgatgattcagctaaagcaaaattggctaaa
tttgacaaacaagcagcgagcctacttgaaaaatttgatgctaaagaattggttgcttta
cttcttcaaggtcgcgtaaaagaccctgataatcaagaagaagttaagattacagctgaa
cgtccattgccatataatggtgaaggaaaaggcttcaagaaaaaaggtaaaggtggcggc
ggacgctacaaaggtcgtggaaatggcgaccgtgatggcaaccgtggcggttaccgtgga
aatcgtgatggtaaagatggcgaacgcggtggagatcgtaaacgcaactggaaagaccgt
gatgataaccgtggaggttaccgtggaaaacgtgatgaccgtcgttttgacgatcgtaaa
caaggagaaaaaactcctcgtaaacgtaccacaggaactgaaaaatcagctggcttcgta
atgcgtagccgtggtgacaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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