KEGG   Lactococcus lactis subsp. cremoris NZ9000: LLNZ_03110
Entry
LLNZ_03110        CDS       T02131                                 
Name
(GenBank) single strand DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lln  Lactococcus lactis subsp. cremoris NZ9000
Pathway
lln03410  Base excision repair
lln03430  Mismatch repair
lln03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lln00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LLNZ_03110
   03430 Mismatch repair
    LLNZ_03110
   03440 Homologous recombination
    LLNZ_03110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lln03400]
    LLNZ_03110
DNA repair and recombination proteins [BR:lln03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     LLNZ_03110
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     LLNZ_03110
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      LLNZ_03110
SSDB
Motif
Pfam: RecJ_OB ssDNA-exonuc_C DHH DHHA1 DUF4254 HTH_psq HTH_40
Other DBs
NCBI-ProteinID: ADJ59613
Position
594371..596599
AA seq 742 aa
MIKAKYDWKLDETVLSEDFLKISKKHKLDELTSRVLYQRGIHDESEIEKFLKPNLEDLHD
PFLLHDMEKATQRILSAIEQGENILIYGDYDADGMTAASVMKSALDELGAEAQVYLPNRF
TDGYGPNLDVYQYYINNENINLIITVDNGVAGVEAIAWAQENGVDVIITDHHSMPDQMPN
AYAIIHPEHPESQYPFKYLAGVGVAFKVACALLEYAPREMLDLVAIGTIADMVSLTDENR
ILVAHGLKVLAQTERAGLQELMKYAGVDFDKVTEETVGFQIAPRLNALGRLDDPNPAIEL
LTGWDEDEAHEIAKMIDQKNSERKDIVEKIHNEALAMLTDEPVQILYHKDWHKGVLGIVA
GRLLEQIHKPVIMLAEEEGILRGSARSIDSFDIFKALNAHRELFIAFGGHKQAAGMTLAL
ENVEAVKKAMSDFVVDNHLDLSKKSPLEVADRCHLDEISLATINNLAKLAPFGMDNPKPR
FLVEDYKVIRSRSMGKDNAHLKLKIQEEKQQIDAVYFQHGSEELEFEQAETKLVVTLSSN
SWNGNTSLQLMIEDADSIGVELLDIRSRQISIPKEANIFSQNQLKHGIMEDVLVIEETPV
DLAGLSVLEEAVSKAASDDFKIIYFKNKITDSYYLTGSGTREQFAKLYKAIYQFPEFDVR
YKLESLADYLNIPHLLLVKMIKIFEELEFVNIDNGLMTVNKAAQKREISESTIYQELEKI
VKMQELFALAPVKEIYQKLLEK
NT seq 2229 nt   +upstreamnt  +downstreamnt
atgataaaagcgaaatatgattggaaattggacgagacagtcctttcggaagattttcta
aaaataagcaaaaaacataaattagacgaattaacaagtcgagtgctttatcaaagaggg
attcatgatgaatctgaaattgaaaaatttttaaagccgaatttggaagatttgcatgac
ccatttttgcttcacgacatggaaaaagcaacacaaagaattttatcagctattgaacaa
ggcgaaaatattctgatttatggggattatgatgctgatggtatgacagctgcttctgtc
atgaaatctgctcttgacgaattaggcgccgaagctcaggtttacttaccaaatcgattt
actgacggttatggtccaaaccttgatgtttatcaatattatattaacaatgaaaatatc
aatcttattatcactgtggataatggggtagcaggggtggaggcaatcgcttgggctcaa
gaaaatggagtggatgtcattattactgaccaccattcaatgcctgaccaaatgcctaat
gcctatgccattattcatccagagcatccagaaagtcaatatccttttaaatatttggcc
ggtgttggagttgcttttaaagtcgcctgtgccctcttagaatatgcaccccgcgaaatg
ctagatttggtggccattgggacgattgctgatatggttagtttaactgacgaaaatcga
attttagtcgctcatggtcttaaagttcttgcccaaacagaacgtgcgggtttgcaagaa
ttaatgaaatacgccggcgtcgactttgacaaggtcaccgaagaaactgtcggttttcaa
atcgcgccacggttaaatgctttaggacggcttgatgaccctaatccagcaattgagtta
ttaacaggttgggacgaagatgaagctcatgaaattgctaaaatgattgaccaaaaaaat
tctgagcgaaaagatatcgtggaaaaaatccacaatgaagctctagcaatgttgacagat
gagcctgtccaaattttatatcacaaagattggcataagggtgttttaggaattgtggct
gggcgtttattggaacaaatccataaaccagtaattatgctcgccgaagaagaggggatt
ttgcgcgggtctgctcgctcaattgatagttttgatatttttaaagcactaaatgcccac
cgcgaactttttattgcttttggagggcataaacaggcggcggggatgactctagctctg
gaaaatgttgaagcggttaaaaaagcaatgagtgattttgttgtggataatcatttagat
ctttctaaaaagagtccacttgaagttgcggatcgctgtcatttggatgaaatttcactt
gctactattaataatttagcaaaattagccccttttggtatggataatcccaaaccgcga
ttcttagtagaagattataaagtcattcgaagtcgtagcatgggcaaagataatgcacat
cttaaattaaaaattcaagaagaaaagcaacaaattgatgccgtttattttcaacatggc
tcagaagagctagaatttgaacaagccgaaactaaacttgtggtgacactttcaagtaat
agttggaatgggaacaccagtcttcaactgatgattgaagatgccgattcaataggtgtg
gaactccttgatatacggagcagacaaatttctatccccaaagaggctaatattttttct
caaaatcagctaaaacatggtataatggaagatgtgcttgtcatcgaagagacacctgta
gatttagcaggtttgtcagtattagaagaagctgtcagtaaagcagcatcggatgatttt
aaaataatctattttaaaaataaaatcactgatagctattatttaacaggaagtggaaca
cgtgaacaatttgcaaagctctataaggcgatttatcaatttccagaatttgatgttcgt
tataagcttgagtctcttgcagattatttgaatattcctcatctcttgcttgtcaagatg
ataaaaatctttgaagaacttgaatttgtcaacattgacaatggcctaatgaccgttaat
aaagcggctcaaaaacgtgaaatttctgaaagtacaatttaccaagaattagaaaaaatt
gtaaaaatgcaagaactctttgccttagcgccagttaaagaaatttatcaaaaattatta
gaaaaataa

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