KEGG T01183: LLO

Legionella longbeachae: LLO_1933

Entry

LLO_1933 CDS T01183

Gene name

lig

Definition

DNA ligase (EC:6.5.1.2)

Orthology

K01972

DNA ligase (NAD+) [EC:6.5.1.2]

Organism

llo Legionella longbeachae

Pathway

llo03030	DNA replication
llo03410	Base excision repair
llo03420	Nucleotide excision repair
llo03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:llo03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:llo03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:llo03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:llo03430]

SSDB

Motif

Pfam:

DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD PTCB-BRCT HHH

Other DBs

NCBI-GI:

NCBI-GeneID:

Pasteur:

UniProt:

Position

complement(2274837..2276852)

AA seq 671 aa
MIIDEIKEQAARLKDKIRQYDYHYYVLDEPLVPDVEYDRCFRALQNLEAQHPELLTADSP
TQRVGGTPADAFAPVTHRQPMLSLSNVFSEEELQAFVKRVTEKLDEPAQQLVFTCEPKLD
GLAVNITYENGVLVYAATRGDGTTGENITANIKTIAAIPLVLRSNKPPRFIEIRGEVYMP
KSGFEQYNKKAKELGEKTFANPRNAAAGSLRQLNPAVTANRPLAIYCYGIGACEDYRLPN
THWEQLQLLKELGFKVSSESKREVGIKGCLDYYCNMLARRDQLPFEIDGVVYKVDSIALQ
QQLGFISRAPRFACAHKFPATEEITEILAVDFQVGRTGALTPVARLAPVNVAGVTVSNAT
LHNMDEITRKDIRIGDKVIIRRAGDVIPEVVSVVLEQRPADTKEICLPLKCPVCDSDVVR
EEGEAVARCIGGLFCKAQLKRMMWHFASRKAMHIEGLGSVLIEQLVDEGIVRHLPDLYRL
DVSTLANLPRMGEKSAKNLLQALEHSKKTTLSRFLYALGIREIGEASARVLAEHFGDIEA
ISNATEADLMSLEDMGPVGAANIVHFFAQTHNLQVIQHLLELGIHWPKIEKKQQNKEHPL
FGKTVVLTGTLNTLSREEAKAKLLILGAKVSGSVSAKTDYVIAGIEAGTKLDKANNLGIS
ILDEEQFLHML

NT seq 2016 nt +upstreamnt +downstreamnt
atgattattgatgaaataaaggaacaagcggctagactaaaagataagataagacagtat
gattatcattactatgtactggatgaacctttagtacctgatgttgagtatgatcgatgt
tttcgtgctttacaaaatttagaagcgcagcatcctgaattattgactgctgattcacca
acacaacgtgtcggaggtactcccgcagatgcttttgctcccgtaacccacagacaacct
atgttgtccttgtcaaatgttttcagtgaagaagagttacaggcatttgttaagcgagtc
actgaaaaattagatgagccagctcagcaattagtttttacgtgtgagccaaagttggat
ggtcttgctgtaaatattacttatgaaaatggagtattggtttatgcagccactcgtgga
gatgggactacaggtgaaaacattactgccaacattaaaacgattgcagcaataccttta
gttttaagaagcaataagccgcctcgttttattgaaatacgtggcgaagtatatatgcca
aaatcagggtttgagcaatacaataaaaaagccaaagaattgggtgaaaaaacctttgcg
aatccacgtaacgcagctgctggaagtttacggcaattgaatcctgcagtaacggcaaat
agaccattggcgatttattgttatggtattggcgcttgtgaagattatcgtttaccaaac
actcattgggagcaattgcaattactaaaagaacttggttttaaagtttcttctgaatca
aaaagggaagtgggaattaaaggttgtttggattattactgcaacatgctcgccaggcgt
gaccaacttccttttgaaatcgatggtgttgtgtataaagtggatagtattgctttacaa
cagcaattgggttttatttcccgagcccctcgttttgcttgcgcacataaatttccagct
accgaagaaataacagagattttagccgttgattttcaagttgggagaaccggggcttta
acgcccgtggctcgtttagcgccagtaaatgttgctggggttacggtgagtaatgccacg
ctgcataatatggatgaaattaccagaaaagatattagaataggggataaagtgattatc
cgtcgcgctggcgatgtcattcctgaggtggtttcagttgttttagaacaacgacccgca
gatactaaggaaatttgtttacctctgaaatgccctgtttgtgattctgatgtcgttcgt
gaagaaggtgaagcggttgcccggtgtattggtggtttgttttgcaaagcccaattaaaa
agaatgatgtggcattttgcctcacgtaaggcaatgcatattgaaggattaggttcggtt
ttaatagaacaattggttgatgaaggtattgtacggcatctccctgatctttatcggctt
gacgtttctacattggcaaatcttccgcgtatgggtgagaagtctgcaaaaaacttatta
caagccttagaacatagcaaaaagaccacattaagtcgttttctttatgctttaggaatt
cgcgaaattggtgaggcaagtgctcgggtgttagcagagcattttggagatattgaagca
atttcaaatgcaacagaagcagatctcatgagtttggaggatatggggcctgttggcgct
gcaaatatagtccatttttttgcacaaactcacaacctgcaagtgattcaacatttgtta
gaacttggaattcattggccaaaaattgagaaaaaacagcaaaataaggagcacccttta
tttggaaaaactgtggtactcactggaactttaaatacactgagtcgagaagaggctaaa
gcgaaattactcatcttgggtgccaaagtaagtggtagcgtatcggcaaaaacagattat
gtgattgctggcattgaagcagggacaaagcttgataaagcaaataatttagggatttct
atcttggatgaagaacaatttcttcatatgttataa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
   PASTEUR-LLO (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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