KEGG   Lactococcus lactis subsp. lactis CV56: CVCAS_0432
Entry
CVCAS_0432        CDS       T01964                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
llt  Lactococcus lactis subsp. lactis CV56
Pathway
llt03030  DNA replication
llt03430  Mismatch repair
llt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:llt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CVCAS_0432 (dnaE)
   03430 Mismatch repair
    CVCAS_0432 (dnaE)
   03440 Homologous recombination
    CVCAS_0432 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:llt03032]
    CVCAS_0432 (dnaE)
   03400 DNA repair and recombination proteins [BR:llt03400]
    CVCAS_0432 (dnaE)
Enzymes [BR:llt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CVCAS_0432 (dnaE)
DNA replication proteins [BR:llt03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CVCAS_0432 (dnaE)
DNA repair and recombination proteins [BR:llt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CVCAS_0432 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DUF4351
Other DBs
NCBI-ProteinID: ADZ63095
Position
442775..445957
AA seq 1060 aa
MFAPLNTKTEYSFLDSVVKVDDYLETAHRLGYQTVGICDVGNLHAAFRFVRKAQKFNLQP
IISIELNFEWRGLPIAFSFIAKDTEGYKNLLRISTLHNYGRRQFSDIQNHLSGIALIIPE
TYGSLSELTELSSVADEAFIGIDQLTDKGAKFNLPTLPFPAIRYLNFADNEILAILHAVR
DGVSFDESLTISSNELLQRPEAYETYFLKYFPQALKNLSALTAKIAYQFDEKLELPRFDK
KRQAVEHLREEATLGLSARLEEKNLLTEVSSVNLQDLSVYQERLEKELSVIHQMGFDDYF
LIVADLLRYAREQDIYCGMGRGSAAGSLVAYVLGITQVDPVQHNLFFERFLNPERVAMPD
IDIDMPDDRRAELLAYMKNRYGSDHVAQIVTFSTLGKRQALRDVGKAFGMTEAELSNLTR
MLVRRFGTLADEYENNQRFKAEVLKNGKLKRIYEVARRIEGMPRQTSTHASGVVLSEESL
VNYVSLKPSEDLALTQYEAPDVEAIGLLKIDFLGLRNLTIISRLRDLVKRRQKIDIDPLK
INLEDEDTLALFRAGNTMGIFQFENPQMRRFLRNLAPSKFDDIVDATSIFRPGPSQFIPQ
FVARRHGKEIVPTVDDSISEILKPTYGIMIYQEQIMQVAQAFAGFSLGKADLLRRAISKK
KGSELEKLREDFLDSASHNGHSKEKAEEIYDLIERFANYGFNRSHGFAYGALAFQIAYFK
AHFPDEFYEIQLRDRKREVMILDALENGFEIEKPSINLMKIGDFVKNKKIRLGLAHVQGI
SRDLAKWIVENQPYKDLADFVEKLPNNFHKKENILPLIQIGAFDYADSNRGKLAYNLADH
ANLLNYYSDDIFMASSGGGFAYHEAEDYSETEKYDFEKNLLGIGVTPHPLQNLARRFEGN
FTPLAQLVKNRRMTILVEINYIRTHRTKTGQTMAFLTVSDSRENFDVTLFPEIYRQFSGE
LEQGKFYLISGKVTERNDELQLVTDRISPALETDRKLWLNLRDDKYNQKISQILREFPGS
HQVILHYSNLKKTIQTKIYVEESEILQKRLEGYVIAGIYK
NT seq 3183 nt   +upstreamnt  +downstreamnt
atgtttgcacccttgaatacaaaaactgaatatagttttttagatagtgtcgttaaagtt
gatgactatttggaaacggcgcaccgtttaggttatcaaacggttggaatttgcgatgtt
gggaatcttcatgctgcttttcgttttgtcagaaaagctcaaaaatttaatttgcaaccc
attattagtattgagctaaattttgaatggcggggtttaccaattgctttttcttttatt
gctaaagatactgaaggttataaaaacttacttcggatttcgacgcttcataactatgga
cgccgtcaattttctgatattcaaaatcatttatcaggaatcgccttgattattcctgaa
acttacggaagtttgagcgagctgacagaactttcgtcagtagctgatgaagcttttatt
gggattgatcaactgacagataaaggggctaaatttaatttaccaacacttccttttcct
gctattcgctatttgaattttgctgataatgaaattttagcaattttgcatgcagtgcgt
gatggagtttctttcgatgaaagtttaacaatcagttctaatgaacttcttcaaagacca
gaagcttatgagacttacttcctgaaatattttccacaggctttgaaaaatctgtcagca
ttaacagcaaagattgcttatcagttcgatgaaaaattggagcttcctagattcgataag
aagagacaggcagttgaacatttacgagaagaagcgactttaggtttgtcagctcgactt
gaagaaaaaaatttactgacagaagtctcgtcagtaaatttgcaagatttgtcagtttat
caagaacgtttagaaaaagagttgtcagtcattcatcaaatgggatttgatgactatttc
ttgattgtcgcggatttgttgcgttatgcccgtgaacaagacatttattgtggaatgggg
cgtggttcagcggccggctccttagttgcctatgttttaggaattacacaagttgaccct
gttcaacataatcttttcttcgaacgttttttgaatccagaacgtgtggccatgcccgat
attgacattgacatgccagatgaccgtcgtgctgaattattggcctatatgaaaaacaga
tatggttcagaccatgtcgcacaaattgttactttttcaaccttgggtaaaagacaggcg
cttagagatgttggtaaagcttttggaatgactgaagctgaattatccaatttgactcgg
atgcttgtgcgtcgttttggaactttggctgatgagtatgaaaataatcaacgttttaaa
gctgaagtgttaaaaaatggaaaattgaaaagaatttatgaagttgcaagacgaattgag
ggaatgccccgtcagacttcaacacacgcttcaggtgtcgttctttctgaagaatctttg
gtgaattatgtatcattaaaaccgtcagaagatttggctttgacgcaatatgaggcgcca
gatgttgaagcaattggacttttgaaaattgactttttgggattacgtaatttaacaata
atttctagattacgtgatttggtgaaaagacgtcaaaaaattgatattgatccactaaaa
ataaatttggaagatgaagacacattggccctttttcgggctggaaataccatgggaatt
tttcagtttgaaaatccacaaatgcgacgttttttaagaaatcttgccccaagtaaattt
gatgatattgttgatgcaacttcaattttccgtcctggtccatcacagtttattccacaa
tttgttgctcgacgacatgggaaagaaattgtgcctactgtggatgattctattagtgaa
atcttaaagccaacatacggaattatgatttatcaggagcaaattatgcaggtggctcaa
gcttttgctggcttttctcttgggaaagctgaccttcttagacgagcaatttctaagaaa
aaagggtctgagttagaaaagttgcgtgaagatttcttagattcagcaagccataatgga
cattctaaagaaaaagcagaagaaatctatgacttaattgaacgttttgctaattatggt
tttaaccgttcacacggttttgcttatggggcacttgcttttcaaattgcttattttaag
gcacattttcctgatgaattttatgaaattcaattacgtgatcgcaaacgtgaagtaatg
attttagatgcgttagaaaatgggtttgaaatagaaaaaccaagcatcaatctgatgaaa
attggcgattttgtaaaaaataaaaagattcgtttaggattggctcacgttcaaggaatt
tctcgtgatttagcaaaatggattgttgaaaatcaaccctataaagatttagcagacttt
gtcgaaaaattacctaataattttcataaaaaagaaaacattctccctttgattcagatt
ggagcctttgattatgcagattcaaatcgagggaaattagcttataatttggctgaccat
gctaatttattaaattattatagtgatgatatttttatggcaagttctggtgggggcttt
gcctatcatgaggcagaagattattcagaaactgaaaaatatgattttgaaaaaaattta
ttaggaattggggtaacaccacatcctttgcaaaatctagctcgcagatttgaaggtaat
tttacacctcttgctcaacttgtgaaaaataggcgaatgactatcttggttgaaatcaat
tacattagaacgcatcggactaagacagggcaaacaatggccttcttaacagtatctgat
agtcgtgaaaattttgatgtgacactttttccagagatttatcgtcaattttctggtgag
cttgaacaagggaaattttatctcatcagtggaaaagtaacagaacgtaatgatgaatta
cagctggttactgaccgaataagtccagctttagaaacggatagaaaactttggctaaat
ttaagagatgataagtataatcaaaaaatttcacaaattttgcgtgaatttccgggctct
catcaagtgattcttcactattcaaatttgaaaaaaacaatccaaacaaaaatttatgtg
gaagaatcggagattttacaaaaaaggctagaagggtatgttatagctggtatttataaa
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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