KEGG   Labilithrix luteola: AKJ09_09600
Entry
AKJ09_09600       CDS       T04033                                 
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
llu  Labilithrix luteola
Pathway
llu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:llu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AKJ09_09600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:llu03019]
    AKJ09_09600
   03009 Ribosome biogenesis [BR:llu03009]
    AKJ09_09600
Enzymes [BR:llu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AKJ09_09600
Messenger RNA biogenesis [BR:llu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AKJ09_09600
Ribosome biogenesis [BR:llu03009]
 Prokaryotic type
  rRNA helicases
   AKJ09_09600
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII AAA_30 P-loop_SecA AAA_22 YuA_Gp49 AAA_19 FlgT_C
Other DBs
NCBI-ProteinID: AKV02937
UniProt: A0A0K1QB92
Position
10123825..10126110
AA seq 761 aa
MTQVQAPTPGDTNAAKPTFDALQLSPDVRKALGKMGYAHPTPVQLAVYEPATRGKSLVVQ
ARTGTGKTTAFGLPIIDGLVKKSVAGVQALILTPTRELAIQVSKELEQIAEFRGVKILPI
YGGAPMGRQVEALAEGVQIVSGTPGRVLDHLRRGTLDPSHIRIFVLDEADEMLSMGFAKE
LNAIIEMLPKERQGLYFSATIPPDVERLANSHLHNPEYVTLSSDQVGALSISHFVYLVRE
GDKRASLVRIIEVEDPESAVVFCNTKDETERVAEALKSKGYDADWLNGDLEQRERERIMA
KTKEGKLRFLVATDVAARGIDISHLTHVINADFPESAEQYVHRTGRTGRAGRTGTAISIV
GPKDVGHLYMLRLTYKIRPIERTLPTKGELRTREETDLIAFLADAYGAKTPDPMHLAVAR
RLLTSESAETIVAGLLGDHLGATSTDDVSQQAAEARRAKNPPAEPVATQPRPEVRRDARR
DERAIAQAHTSDEPRTLRDGQTLPERGQRDFGRRQDRPQHERRDRDRDRDRDRGRDRADN
RGPQAQVRGPQSEGRGPQAQGRDRDRDRDRDRQRPAQVQPTSERQPQAALSDWQPPADAD
DDRPILAGRAESRGDGRRQERPRRNEREGRPRHGGGGYTIGYTVEGESNEDAVETTRHPR
EGARPHALPEPASGGETFGATEGGDVANIFVNVGRRDGLKPGDVQSMLQDGGIADFDTRN
VRVRERITFVTVRKAEMEQAIRALVGQVVGGRTVNAEPARG
NT seq 2286 nt   +upstreamnt  +downstreamnt
atgacccaggtgcaggccccgactcccggtgacacgaacgcggcaaagccgacgttcgac
gcactccagctcagccccgacgtccgcaaggcgctcggcaagatggggtacgctcatccc
acgccggtgcagctcgcggtctacgagcccgcgacgcgcggcaagagcctcgtcgtccag
gcccgcacgggcaccggaaagaccacggccttcggcctgcccatcatcgatgggctggtg
aagaagtcggtcgccggcgtccaggcgctgattctcacgccgacgcgcgagctggcgatt
caggtgtccaaggagctcgagcaaatcgccgaattccgcggagtgaagatcctgcccatc
tacggcggtgcgccgatgggtcgccaggtcgaagcgctcgcggagggcgtgcagatcgtc
agcggtacaccgggccgcgtgctcgaccacctgcgccgcggcacgctcgatccgtcgcac
atccggatcttcgtgctcgacgaggcggacgagatgctctcgatgggcttcgccaaggag
ctcaacgcgatcatcgagatgctcccgaaggagcgccaggggctctacttcagcgcgacg
atcccgccggacgtcgagcgcctcgccaacagccacctgcacaaccccgagtacgtcacg
ctctcgagcgatcaggtcggcgccctctcgatcagccacttcgtctacctcgttcgcgag
ggcgacaagcgcgcctcgctcgtccgcatcatcgaggtcgaagatccggagagcgcggtc
gtcttctgcaacacgaaggacgagaccgagcgcgtcgccgaggccctgaagagcaagggc
tacgacgccgattggctcaacggcgatctcgagcagcgcgaacgcgagcgcatcatggcc
aagacgaaggaaggcaagcttcgcttcctcgtcgccaccgacgtcgcggcacgcggcatc
gacatttcgcatctcacgcacgtcatcaacgcggacttccccgagtccgccgagcaatac
gtccaccgcacgggccgaacgggccgcgcgggccgcactggcacggcgatctccatcgtc
ggaccgaaggacgtgggccacctctacatgctgaggctcacgtacaagatccgtccgatc
gagcgcacgctccccacgaagggcgagctgcgcacgcgggaggagacagacctcatcgcc
ttcctcgccgatgcctacggggcgaagacgcccgatccgatgcacctcgccgtcgcgcga
cggctcctgacgtcggagtcggcggagacgatcgtggcgggtctgctcggcgatcatctc
ggcgcaaccagcaccgacgacgtctcgcagcaggcggccgaagcacggcgcgcgaagaat
ccgccggccgagccagtggccacgcagccccgccccgaagttcggcgcgacgcgcgacgc
gacgagcgagcgatcgcgcaggcccacacgagcgacgagccccgcacgcttcgcgacggc
cagacgctccccgagcgtggacagcgcgatttcggtcgccgccaggaccgcccgcaacac
gagcgtcgtgatcgtgatcgtgatcgtgatcgcgatcgcggtcgagaccgcgcggacaac
cgcggcccgcaggcccaagttcgcggcccgcagtccgaaggtcgcggcccgcaggcccaa
ggtcgcgacagagatcgtgatcgtgatcgcgaccggcagcggcctgcccaggtgcagccc
acgagcgagcggcagccgcaagcggccctctccgattggcagccgccggcagacgcggac
gacgatcgccccatcctcgcgggacgcgccgagtcgcgcggcgacggacgccgccaggag
cgcccgcgtcgcaacgagcgcgaaggccgcccgcgccacggcggcggcgggtacaccatc
ggctacacggtcgagggtgaatccaacgaggacgccgtcgagaccacgcgtcatccccgc
gaaggcgcccgaccgcatgccctccccgagccggcctccggcggcgagaccttcggcgcg
accgagggcggcgatgtcgccaacatcttcgtgaacgtcggacgtcgcgacggcctcaag
ccgggcgacgtgcagagcatgcttcaggacggcggcattgccgacttcgacacgcgcaac
gttcgcgttcgagagcgcatcaccttcgtcaccgtgcgcaaggcggagatggagcaggcg
attcgcgcgctcgtaggtcaggtggtcggcgggcgtaccgtcaacgccgaacctgcacgc
ggctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (45)   

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