KEGG T01014: LMJF_24

Leishmania major: LMJF_24_0760

Entry

LMJF_24_0760 CDS T01014

Definition

putative DNA repair and recombination protein RAD54

Orthology

K10877

DNA repair and recombination protein RAD54B [EC:3.6.4.-]

Organism

lma Leishmania major

Pathway

lma03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:lma03440]

SSDB

Motif

Pfam:

SNF2_N Helicase_C DEAD ResIII

Other DBs

NCBI-GI:

NCBI-GeneID:

GeneDB:

UniProt:

Position

24:265169..268552

AA seq 1127 aa
MRKSAAGSGVANGTFRPPTMSSEGTPAERKPRTHPLLPATLAAAVPRFMTGWRALSNGSF
KAPGSGDASNISDDTVDLPGPTVTCVTSTGARREVMYPAVTPHSAGSTAHDDLVAYRLAR
RSQIDYHQPESAAKAVAARALQAAAAARGKTDADSEDSGSQGGGTAKLLKVEAGTGGVKA
APGAPEAAEGGTAAAASEGHETAAAAAANEDAIPADKVVSRYPVSPYGKLYFQVETDGAT
RHESVGIVIIDTELLGAIMYDRVGRQYGNRPDPGYPIKQEEVDSAKAGSVLKVGTKSVLL
ITALTEEAFRSGEFFLRSEHDLRVKEDKAKAEAAAAEEAKARKPGMSFGNSLSNSSAFAS
ILFRRRPKDGETGFVVPVAGRPKMGKNGIIMDELHPLHDPDREKAVVLFRADYKRDVHGR
RQVSVVVDPIIGDKLRPHQIIGVKFLFDCITGERMLGYHGAILADEMGLGKTIQTVATIY
TCLKQGKHGQPTARKCLVVTPSSLVKNWCNEFDKWLGEGAVRHFAISESTPKGDRIISRF
DGDGDVLVISYDQLRKYIDRLSGLRSVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRIIL
SGTPIQNDLSEFHAMVNFVNPGILGNRDLFARVFEEPVSLGRDPGCPDHLKSLGRDRARY
LSVLTQRFILRRTQSINESYLPPKVDVTVFVRLGEKQELAYQKLADVVESAECTPLVLIS
ALRKLCNHMDLFHDAVHLSHQIGNSAGASAQQQQQAGRRRGRSSAAGESQGIPLSVLPKG
FRPGGLSMDCGSKMHFVSLVLDELKGNGEHDKLVIVSNFTQTLDIIAALCNSKQIAYFQL
DGSTPIKKRQQLVDYFNVPGSQEIVFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQA
MGRVWRDGQKKCVFIYRLLSTGTIEEKIYQRQVSKQGLSANVVDMQEDSKQHFTLEELKS
LFKYKADTLCDTHDLLGCTSCEAAESLATSGRGSRGKQAEQIKMQFRKVGQPKKKSGPRM
DELKAWRHISAVASFNLDSVTRAVAKHAPSLLSFLFADERDNTKVAGPAVSTRVKVDKPA
FEEDEETITCASQAAMQQQESEMEIELIDDDDDEEEAELESSEEVSD

NT seq 3384 nt +upstreamnt +downstreamnt
atgcgcaagtcagcggcaggtagcggcgttgccaacggcacgttccgccctcccacaatg
agtagtgagggtacgccggcagagcgcaagcccaggacgcacccactattgcctgccacc
ttggctgcagccgtgccgcgcttcatgaccggttggcgggccctcagcaacggcagcttc
aaggcacccggttcaggggatgccagcaacatcagtgacgacaccgtggatctgcctggc
ccgactgtgacctgtgtcacctccactggcgctcggcgcgaggtgatgtaccccgccgtc
accccacatagcgcgggcagcacggcacacgacgaccttgtggcttaccggctggcacgg
cgcagccagatagactaccaccagccggagtcggccgccaaggcggtggccgcgcgggcc
ctccaagctgccgcggcagcgcgagggaagacggacgcggactctgaggacagcggaagc
cagggaggcggcactgcgaagctgctcaaggtggaggctggcaccggaggcgtgaaggcg
gctcctggtgcgccggaggctgccgaaggtggcacggcagcggcagccagcgagggccac
gagaccgctgccgccgccgctgcgaacgaggacgctattccagcggacaaagtggtgagc
cgctaccccgtcagcccctatggcaagctgtacttccaggtggagacggacggcgcgacg
cggcatgaatctgtcggcatcgtcatcatcgatacggagttgctgggggctattatgtat
gaccgcgtggggcggcagtacggcaaccggcccgaccctggttacccgatcaagcaggag
gaagtggacagtgcgaaggcgggcagcgtcttgaaggtgggcacaaagagtgtgctgctc
atcacggcgctcaccgaggaggcgttccgcagcggcgagttcttcttgcgctccgagcac
gacctccgcgtgaaggaggacaaggccaaggccgaggccgcggccgccgaggaggcgaag
gcgcggaagcccgggatgagcttcggcaactcgctcagcaacagcagcgccttcgcctcc
atcctgttccgccgtcgccccaaggatggggagacgggcttcgtcgtccccgtagccggg
cgtccaaagatgggcaagaacggtatcatcatggacgagctgcacccgctgcacgacccg
gaccgcgagaaggcggtggtgctgttccgcgccgactacaagcgcgacgtgcacggccgt
cggcaagtctccgtcgttgtggacccgatcattggcgacaagctgcggccgcaccaaatc
attggtgtaaagtttctcttcgactgcatcacgggtgagcgcatgctcggctaccacggc
gccatcctggccgatgaaatgggcttgggtaagacgatccagacggtggccaccatctac
acctgtttgaagcaaggcaagcacggccagccaacggcccgcaagtgcctcgtcgtgacg
ccgtcctcgctggtgaagaactggtgcaacgagtttgacaagtggctgggcgaaggggca
gtgaggcatttcgccatctccgagtcgaccccgaagggggaccgcattatttcccgcttc
gacggcgatggcgacgtcctcgtcatctcgtacgaccagctgcgcaagtatatagaccgc
ctctcggggttacgctctgtcgaactggtcgtctgcgacgagggtcaccgcctcaagaat
gcggaggtgaagacgacaaaggcggtggacatgctgccgacgcgcaaccgcatcatcctt
tccggcacccccatccagaacgacctgtccgagttccatgccatggtcaacttcgtcaac
cccggtatcctcggcaaccgcgacctcttcgcacgcgtcttcgaagagcccgtctccctt
ggccgcgacccgggatgcccagaccacctcaaatctcttggccgcgatcgcgcgcgttac
ctctcggtgctgacgcagcgctttatccttcgccgcacgcagtccatcaatgagtcctac
ctgccgcccaaggtggacgtcaccgtcttcgtgcggctgggagagaagcaggagcttgcc
tatcagaagctggccgacgtggtcgagtctgccgagtgcacgccgctggtgctcatttcc
gccctgcggaagctgtgcaaccacatggatctcttccacgacgcggtacacctgtctcat
cagatcggcaactcggcaggtgcgtcggcgcagcagcaacagcaggctggccgccgtcgc
ggccgcagcagtgctgcaggtgaatcgcaaggcattcccctctctgtgctaccgaagggg
tttaggccgggtggcttgagcatggactgtggcagcaagatgcattttgtgtccctcgtg
ctcgacgagctgaagggaaacggcgagcacgataagcttgtcattgtgtcgaacttcacg
caaacactcgacatcattgcggcgctgtgtaactcgaagcagatcgcgtacttccagctt
gatggcagcacgcccatcaagaagcgccagcagctagtcgactacttcaacgtgcctggc
tcgcaggagatcgtgtttctgctctcctcgaaggccggcggtgtcgggctgaacctgatc
ggtgcgaaccggctgatcctcttcgaccctgactggaaccccgcaaacgatgcgcaggcg
atgggccgtgtgtggcgcgatggccagaaaaagtgcgtcttcatctatcgcctgctcagc
accggcaccatcgaagagaaaatctaccagcggcaagtgagcaagcaaggcttgtcggcg
aacgtggtggacatgcaggaggattcaaagcagcacttcacgctggaggagctcaagtcc
ctcttcaaatacaaggccgacacgctgtgcgacacccacgacctgctgggctgcacatcc
tgcgaggccgccgagtcgttggccacgagcggccgcggcagccgcggcaagcaggcagaa
cagatcaagatgcagttccgaaaggtgggccagccaaagaagaagagtgggccacgcatg
gatgagttgaaagcgtggcgccacatcagcgccgttgcctcgttcaaccttgacagcgtt
acccgcgccgtggcgaagcacgcgccatcgcttctctcctttctcttcgctgacgagcgc
gataacaccaaggttgccgggcccgccgtgtcgacccgcgtgaaggtcgacaagcccgcc
ttcgaggaggacgaggagacgatcacgtgtgccagccaagccgccatgcagcagcaggag
agcgagatggagattgagctgatcgacgacgacgatgacgaagaagaggcggaactcgaa
tcgtccgaagaggtcagtgactag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   GENEDB (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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