KEGG T01014: LMJF_36

Leishmania major: LMJF_36_0800

Entry

LMJF_36_0800 CDS T01014

Definition

hypothetical protein

Orthology

K03144

transcription initiation factor TFIIH subunit 4

Organism

lma Leishmania major

Pathway

lma03022	Basal transcription factors
lma03420	Nucleotide excision repair

Class

Genetic Information Processing; Transcription; Basal transcription factors [PATH:lma03022]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:lma03420]

SSDB

Motif

Pfam:

Tfb2 Helicase_C_3

Other DBs

NCBI-GI:

NCBI-GeneID:

GeneDB:

UniProt:

Position

36:283379..285259

AA seq 626 aa
MHTLLFLSALGDPTTASEVGAEGVRRRVVFSEAHPPLLLTTIGTSGHTALSKEHAEALAV
ISGNMSSSSSALDVPLVEVICSYPTREGLCAECPALLLLVYEHVVAELQAGRRAVDVFRG
TSRQDHLSELLAVRSLSELFERLYPLSQSCILDESTASSQFWRQARVTLEAAWAAPHDAK
GRALLTQVRGQPRFHFCGPRDVETPGEGYPLHPVSLERALATSKRFLRTAMTCALDGSTD
ALAGRQPELRAVLQLAHLVPLTPSTGAPPRKEVTPEGLSFCMVSLQQRWWILVNAALERV
LLLTRAAVNGNGNTSGSSGVTKPLLWQLLAVLSVLDTTQYVFAFPERQQDLAAHHLLARL
SEVGLVYPLLSNDRKCFVLSPDFLHAIHWHASAPLSLTFNHHLLRSASGVSGAGIGDLRR
EDTDTIITETNFRLFAYTNDADLLNILNQFAELEEIVNGNLHCYRVTRASFAAAMRKGIT
AAQVLRFLSLRAHPSMLRRHGEREENGDTASPSSAGGASSSFTFSASPRRGAVAGTCGST
TSIDAVSTLVVPQSFCDQMRMWESECRRVVFEHHVVLLRNMSTQQQKAVTAYLTDAGEVD
AVVHAERGYMVIREEVFERLVAPLLG

NT seq 1881 nt +upstreamnt +downstreamnt
atgcacacgcttctctttctttctgccctgggcgatccgaccacagctagcgaagtggga
gccgaaggcgtccggcgccgtgtcgtcttctcagaggcgcacccccccctcctcctcacc
accataggtacaagtggccacactgccttgagtaaagagcacgcagaagctctcgcggtg
atcagcggcaacatgtcctcgagctcctcagcattggacgtgccacttgtagaggtcatc
tgcagctatcccacccgcgaggggctatgcgccgagtgccctgcactgctgctgctcgtc
tacgagcacgttgtagcggagctgcaggcggggcgacgcgctgtggacgtgttccgtggc
acctcgcggcaggaccacctgagcgaattgctcgctgtgcgctccttgtcggagctgttt
gagcgtctttacccgctgtcgcagtcttgcatcctcgatgagagcactgcgagttcgcag
ttctggaggcaggcacgggtgaccttggaagccgcgtgggcggcgccgcatgacgccaag
gggcgtgcccttctcacgcaggtgcgcggccagccgcggttccacttttgcgggccgcgc
gacgtcgagacgcccggggagggctatccactgcaccccgtatcgctggagcgggccttg
gcaactagcaagcgcttcctccgcactgcgatgacctgcgcactggacgggtcaacggat
gccctggccgggcggcaaccggagctgcgcgcggtgctgcagctggcccaccttgttccc
cttactccgtcgacaggggcacctccgaggaaggaagtcacgccggaggggctcagcttc
tgcatggtgtcgctgcagcagcggtggtggatactggtgaacgcggcgctggagcgcgtt
ctgctgctcactcgcgctgccgtgaatgggaacggtaacaccagcggcagcagcggcgtc
acaaaaccgcttctgtggcagctgctggcggtgctgtctgtgttggacactacgcaatac
gtcttcgccttcccagagagacagcaggatctcgcggctcaccatcttctcgcacggctg
tccgaggtcgggctggtgtaccccttactcagcaacgaccgtaagtgctttgtcttgagt
cctgacttcctgcacgccattcactggcacgcgagtgcgccgctgtccctcaccttcaat
catcacctcctgcggagcgctagcggcgtcagcggtgccggcatcggcgacctacgtcgc
gaggacacggacaccatcatcaccgaaacgaacttccgtctgttcgcctacaccaacgat
gccgacctgctcaacattttgaaccagtttgcagaactggaggagatcgtaaacgggaat
ctccactgctaccgcgtgacgcgggccagctttgctgccgcgatgcgcaagggcattacc
gccgcacaagtgctacgctttctttcgctgcgagcgcaccccagcatgcttcgccggcac
ggggagcgggaggagaacggagacacggcgtcgccatcgtccgctggtggcgcctcctct
tccttcactttttcagcgtcccctcgtcgtggggctgttgcgggtacgtgtgggagcacc
acctccattgatgctgtgtcgacgcttgtggttccgcagtccttctgcgaccagatgcgc
atgtgggagagcgagtgtcgccgcgtagtgtttgagcaccatgttgtcctgctacgcaac
atgtcaacgcagcagcagaaggcggtgacagcgtatttgactgatgcaggggaggtcgat
gccgttgtgcacgccgagcgcggctacatggtgattcgtgaggaagtcttcgagcgtctt
gtcgcaccacttttggggtaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   GENEDB (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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