KEGG   Leisingera methylohalidivorans: METH_01235
Entry
METH_01235        CDS       T02961                                 
Name
(GenBank) pseudouridine synthase
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
lmd  Leisingera methylohalidivorans
Brite
KEGG Orthology (KO) [BR:lmd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lmd03009]
    METH_01235
Enzymes [BR:lmd01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     METH_01235
Ribosome biogenesis [BR:lmd03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    METH_01235
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AHC99509
UniProt: V9VQA0
Position
222952..223998
AA seq 348 aa
MSGVQMITVSEDDGGQRIDRWLRRLFPHVNQGRIEKMCRKGELRLDGGRVKANSRVEAGQ
VVRVPPLADSDLKPAAPREMRISEADARMIRDCVIYRDDDVIVLNKPAGLAVQGGSGTTK
HVDGLAEALKFGLEDKPKLVHRIDKDTSGVLVLARNRKAAQGLTAAFRHKNTRKIYWALV
AGVPTPYLGEIKNGLVKAPGHGKSGEGEKMINVHPQDIDDTPGAKRAHTLYATLYRVASR
AAWVAMEPVTGRTHQLRAHMSGMGHPIAGDGKYGGSGQENLGDGWGAQFGGVISKKLHLH
ARRMVFEHPVTHKNVSVVAPLPDHMKESWDTFGWTEDLAADDPFEDLK
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgagcggcgttcagatgattaccgtcagcgaagacgatggcggccagcgtatcgaccgc
tggctgcggcggctgtttccgcatgtgaaccagggccgcatcgagaagatgtgccgcaag
ggcgagctgcgccttgacggcggccgggtgaaggccaacagccgcgtcgaggcggggcag
gtggtgcgggtgccgccgctggcggacagcgacctgaaacctgccgcaccgcgggagatg
cggatctcggaagcggatgccaggatgatccgcgattgcgtgatctaccgcgacgacgac
gtcatcgtgctgaacaagcccgcaggcctggcggtgcagggcggctccggcaccaccaaa
catgtggacggtctggccgaggcgctgaagttcgggctggaggacaagcccaagctggtg
caccggatcgacaaggatacctcgggcgtgctggtgctggcgcgcaaccgcaaggcggcg
caggggctgaccgccgcgttccgccacaagaacacccgcaagatctactgggctttggtt
gccggcgtgccgacgccctatcttggcgagatcaagaacgggctggtgaaggcgccgggc
cacggcaagagcggcgaaggcgagaagatgatcaacgtgcatccgcaggacattgatgac
acgccgggcgccaagcgggcgcatacgctttatgccacgctgtaccgggtggcctcccgc
gctgcctgggtggcgatggagccggtcaccggccgcacccaccagctgcgggcgcatatg
tcaggcatgggccatccgattgcgggcgatggcaaatacggcggctcggggcaggagaac
ctgggcgacggctggggcgcgcagttcggcggggtgatctcgaagaagctgcatctgcac
gcccgccggatggtgtttgaacacccggtgacccataagaatgtctcggttgtggcgcct
ttgccggaccatatgaaagagagctgggacaccttcggctggaccgaggatctggcggcg
gatgacccgtttgaggacctgaagtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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