KEGG   Leisingera methylohalidivorans: METH_23395
Entry
METH_23395        CDS       T02961                                 
Name
(GenBank) OmpA family protein
  KO
K11892  type VI secretion system protein ImpK
Organism
lmd  Leisingera methylohalidivorans
Pathway
lmd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lmd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    METH_23395
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lmd02044]
    METH_23395
Secretion system [BR:lmd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   METH_23395
SSDB
Motif
Pfam: DotU OmpA mCpol
Other DBs
NCBI-ProteinID: AHD03781
UniProt: V9VYM7
Position
unnamed2:complement(236596..238029)
AA seq 477 aa
MADYDDPFAEPGDTDKTVIKPNPGGRRTATPVQQPETPQVQPGAEQTAAPAETGLDAYGV
PQAAAPKPQAAAGGAKAPKMALTGMNQLTACASTLFALISRIRNRAQHMDPDGLRKNVVA
EVRAFENRALQAGIAAQTVKIARYALCATLDDVVLNTPWGGQSAWGLQSMVATFHREVVG
GDRFYDLLARLEKEPGGNIDMLEFLYMCLSLGFEGRLRVEQGGSEKHMQIRGALARIIRN
QRGPVERDLSPHWEGLVKPFKALSVWRLVWITLAATAAVLALQFLGLSWMLSNKTENVVG
QLTIVDSGPRAELERRAPPPPPPPTAPTTEEQIAKVTGFLEPEIKEGIVQVFQKGNTLII
RLAGSGMFGSGSDQLSQKFRTSVNRVAESLNDEKGKIIVAGHSDNIPIRSSRFPSNMALS
LARAKSVMAGMAKVMTDPDRLSAEGRADKEPIADNSTRAGRAKNRRIEILLVQEVEG
NT seq 1434 nt   +upstreamnt  +downstreamnt
atggctgattatgacgatccctttgccgaaccgggggataccgacaagacggtgatcaag
ccgaaccctggcgggcggcggacggccacgccggtgcagcagccggagacaccgcaggtc
cagcctggagcggaacagaccgcggccccggcggagacggggctggatgcctatggcgtg
ccgcaggcggctgcaccgaagccgcaggctgccgcgggcggggcgaaggcgccgaagatg
gcgctgacggggatgaaccagctgacggcctgtgcctcgaccctgtttgcgctgatcagc
cggatccgcaaccgggcccagcacatggacccggatggtttgcgcaagaatgtggtggcc
gaggtgcgggcgtttgaaaaccgcgcgctgcaggcgggcattgctgcgcagaccgtgaag
atcgcgcgttatgcgctgtgcgcgacactggatgacgtggtcctgaacacgccctggggc
gggcaatccgcctgggggctgcagtcgatggtcgcgaccttccaccgcgaggtggttggc
ggcgaccggttttatgacctgctggcgcggctggaaaaggagccgggcggcaacatcgat
atgctcgaattcctgtacatgtgcctgtcgctggggtttgagggccgtttgcgggtggag
cagggcggttccgagaaacatatgcagatccgcggcgcattggcccggatcatccgcaat
cagcgcggcccggtggagcgcgatctgtcgccgcattgggaaggcctggtcaaaccgttc
aaggcgctgtctgtctggcggctggtgtggatcaccctggcagccaccgcggcggtgctg
gcgttgcagttcctgggtctcagctggatgctgtcgaacaagaccgagaatgtggtcggg
cagctgacgattgtcgattccggccccagggctgagctggaacggcgcgcgccgccgccg
ccgccgccgccaaccgcgcctacgaccgaagaacaaatcgccaaggtcaccggtttcctg
gagccggagatcaaggaaggcatcgtgcaggtcttccagaagggcaacacgctgattatc
cggctggccggttcaggcatgttcggttccggctcggaccagctcagccagaaattccgg
acctcggtgaaccgggtggcagaatctctgaatgacgaaaagggcaagatcatcgtggcg
ggccattctgacaatattcccatccgctcgtcccgcttcccgtccaatatggcgctgtcg
ctggcgcgtgcgaaatcggtgatggcagggatggccaaggtgatgaccgatccggaccgg
ctgtcggccgaggggcgcgccgacaaggaaccgattgcagacaacagcacccgcgcaggg
cgggccaagaaccgcaggatcgaaatcttgctggttcaggaggttgaaggatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (43)   

Download RDF
DBGET integrated database retrieval system