KEGG   Listeria monocytogenes FSL R2-561: LMKG_00391
Entry
LMKG_00391        CDS       T01985                                 
Name
(GenBank) ATP-dependent DNA helicase, RecQ family protein
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
lmg  Listeria monocytogenes FSL R2-561
Pathway
lmg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lmg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LMKG_00391
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmg03019]
    LMKG_00391
   03400 DNA repair and recombination proteins [BR:lmg03400]
    LMKG_00391
Enzymes [BR:lmg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LMKG_00391
Messenger RNA biogenesis [BR:lmg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     LMKG_00391
DNA repair and recombination proteins [BR:lmg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LMKG_00391
SSDB
Motif
Pfam: DEAD Helicase_C ResIII RecQ_Zn_bind AAA_22 NAD_binding_9
Other DBs
NCBI-ProteinID: AEO26289
Position
complement(2037158..2038561)
AA seq 467 aa
MNLEKELKEYLGFDEFRPGQKEVIETALAKQNCFAMLPTGTGKTICYQLAGHLMDGLVLI
VSPLLSLMQDQMERMRAHGEKRVAALNSFLKREEKGQILASIHSYKFIFLSPEMLNNETV
KNLLLKQKISLFVIDEAHCISQWGHDFRPDYLMLGRFIQEAKFPVTMVLTATATKKVRAD
ILTQLHLTDCAQIVYSVNRPNISLQVEKFSNQHVKKDRLYELVRKLQTPGIIYFSSKKLA
ESTAHELSEIAELRVAYYHGDMDTEDRIIIQQQFVYGQLDVICATSAFGMGIDKADIRYV
IHYHMPADLEAYLQEIGRAGRDGEDSVAILLYANGDEFIQMQLADQDIPDANLMNLTTEQ
RKTLPETEQRFIDYYQRSGLSTKELTDKMDYRKKWKRANLQQFIGYLHTTDCRRNYILRY
FEEAPLEVTPENCCDLDGAEIINFEKRAKIKQKEIPTWEAYLAYLLQ
NT seq 1404 nt   +upstreamnt  +downstreamnt
gtgaacttagaaaaggaattaaaagaatatcttggttttgatgagttccgtcctggccaa
aaagaagtaattgaaacggctttagcaaagcaaaattgttttgctatgttacctactgga
acaggaaaaaccatttgttatcaattagcgggtcatttgatggatggattagtattgatt
gtttctccgcttctctcccttatgcaggatcaaatggagcgaatgcgcgctcacggagaa
aagcgagtagcggcgcttaatagctttttaaaacgagaagaaaaaggtcaaatccttgcg
agcatccattcatataaatttatttttttatcgccagaaatgctaaataatgaaacggtg
aaaaacttactattaaaacaaaagatcagcttatttgtcatagatgaagcgcattgtatt
tctcagtggggacatgattttcgccctgattatttgatgttaggtaggttcattcaagaa
gccaaatttcctgtcactatggtgcttacggctacggcaacgaagaaagttagagcagat
attttaacgcaactacatctaacggattgtgcgcaaatcgtttattctgttaatcgaccg
aatatttctttacaagtggagaaattttctaaccagcatgtgaaaaaagaccgtttatat
gagcttgttcgcaaactacaaacaccgggaattatttatttttctagtaaaaaattagcg
gaaagcactgcgcatgaattaagcgaaattgctgaattaagagtagcctattatcacggg
gatatggatacagaagatagaattattattcaacaacaatttgtttatgggcaactggat
gtaatttgcgccactagcgcgtttggaatggggatagataaagccgacattcgctatgta
attcattatcatatgcctgctgatttggaagcatatttacaagaaattggtcgagccggt
cgtgatggcgaagacagtgtggcgattctcttatatgcgaatggagatgaattcattcaa
atgcaattagcagatcaagatatcccagatgccaacttaatgaatctgacgactgaacaa
cgcaaaactttacctgaaacagagcaacgttttatcgattactaccaaagaagcggttta
agtacgaaagaattaaccgataaaatggattatcgaaaaaaatggaagcgagctaattta
caacaatttattgggtatctgcatacaacggattgtcgccgtaattatattttacggtat
tttgaagaagccccgttagaagtcaccccagaaaactgttgtgatttggatggagcggaa
ataatcaattttgaaaaaagagcaaaaataaaacaaaaagaaattccaacatgggaagct
tatttagcttatttactgcaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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