KEGG T02288: LMXM_26

Leishmania mexicana: LMXM_26_1350

Entry

LMXM_26_1350 CDS T02288

Definition

putative DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

lmi Leishmania mexicana

Pathway

lmi03410	Base excision repair
lmi03420	Nucleotide excision repair
lmi03430	Mismatch repair
lmi03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:lmi03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:lmi03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:lmi03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:lmi03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_OB_2 DUF4379 Zn-ribbon_8

Other DBs

NCBI-GI:

401423900

NCBI-GeneID:

13449302

UniProt:

E9AYB4

Position

AA seq 431 aa
MQTPSNVSPVCMKMAVWRCSHCLQEFEMVVGHFIDGGGVCPHCHSPQKKLDNVTLRNAQG
ELVTKKPQYVKAPRMIHSNYRSVLFANPHWESLNIQPMLAQRWELVVDELMNSSNGESGT
APDKHLLLASPKIDGIRCMIGYNEKLGEVQFFSRGGIVLECCHGLAPQLLPLFAKDPTLM
LDGELFAPECNFEQLNGLVRRLNRKSDPNIMEAQARLLEYFAFDIMYSAQLSSLSAPFDE
RYMLLKKLIPVCGAKRISNYVHDDTRKKVIRATHGGVATAENGQAVKIYHVPAAQVHPSD
MEDVLNEACSQGFEGVMIRLPKFPYEHGKRSFGLLKYKQMHDAEFKIIGFVPGEGKFKSA
LGAFVCTTKDGKHFHTAPKVSYKRRVELWEHRREYLGKYLTVQYQELSSQNVPRFPVAKA
IRGSEDRRDWL

NT seq 1296 nt +upstreamnt +downstreamnt
atgcagacgccgagcaatgtatcacccgtgtgcatgaagatggcggtgtggcgctgctct
cactgcttgcaggagttcgagatggttgtggggcacttcattgatgggggcggcgtgtgc
ccgcattgccatagtccgcagaagaagctggacaacgtgacgctccgcaatgcacaaggg
gaactggtgaccaagaaaccccaatacgtgaaggcaccgcggatgattcactcgaactac
cgtagcgtgctcttcgctaatccacactgggaatcgctgaacattcagcccatgcttgcg
cagcgctgggagcttgttgtggatgagctcatgaacagcagtaacggcgagagcggcacc
gctcccgacaagcatctgctcctcgcctcccccaagatcgatggcatccgctgcatgatt
gggtacaacgagaagcttggcgaggtgcagttcttctctcgtggcggcatcgttctcgag
tgctgccacggcctcgccccgcagctgctgccgctctttgcgaaggacccgacgctcatg
ctagacggcgagctctttgcgcccgagtgcaactttgagcagctcaacgggcttgtacgc
cggctcaacaggaagtccgacccaaacattatggaggcgcaggcacgcctgctagagtac
ttcgcgttcgacatcatgtacagcgcgcagctctcgtccttgtcggctcctttcgacgag
cgctacatgctgctcaagaagctcatcccggtgtgcggagcgaagcggattagcaactat
gttcacgacgacacgcggaagaaggtgatccgcgcaacgcatggcggcgtggcgaccgcg
gaaaacgggcaggccgtgaagatctaccatgtccctgccgcgcaggttcacccgagcgac
atggaggacgtgctgaacgaggcatgctcgcagggcttcgagggcgtcatgattcgcctt
cccaagttcccctacgagcacggcaagcgcagctttgggctactcaagtacaagcagatg
cacgatgctgagtttaagattattggcttcgtgcccggcgaaggcaagttcaagagcgcc
cttggcgcctttgtctgcacaaccaaggacggcaagcactttcatacagcacccaaggtc
tcctacaagcgccgcgtcgagctgtgggagcatcgcagggagtatctaggcaagtacctg
acggtgcaataccaagagctctcctcgcagaacgtgccgcgctttcctgtcgccaaggcc
attcgcggtagtgaggataggcgagattggctgtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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