KEGG   Listeria monocytogenes ATCC 19117 (serotype 4d): LMOATCC19117_1766
Entry
LMOATCC19117_1766 CDS       T02239                                 
Name
(GenBank) RNA methyltransferase, TrmA/RumA/YefA-family
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
lmoa  Listeria monocytogenes ATCC 19117 (serotype 4d)
Brite
KEGG Orthology (KO) [BR:lmoa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lmoa03009]
    LMOATCC19117_1766
Enzymes [BR:lmoa01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     LMOATCC19117_1766
Ribosome biogenesis [BR:lmoa03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LMOATCC19117_1766
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Methyltransf_31 Met_10 Methyltransf_25 PrmA Cons_hypoth95 MTS RrnaAD Methyltransf_15 Methyltransf_32 Methyltransf_11 TPMT DOT1 DUF2023 Methyltransf_23
Other DBs
NCBI-ProteinID: CBY70665
Position
complement(1812118..1813479)
AA seq 453 aa
MEASLLKKNQSIELTIEDLTHDGSGVGKIDGYPLFIPNTLPGEKVTAKIIKLNKNYGFAR
METIESVSADRVEPPCAVYSKCGGCSLQHLSYDGQLEFKRNQVEETMKRIGKLNVEVPET
LGMENPWRYRNKSQVPVGFVNGKLTAGFYQKRSHAIIDMSTCLIHNEQGDFAVQKTREIL
AKYGTEPYDEQTGKGDIRHIMTRFAHTTGQLMIVLVTTKERMPFKEEIVRELVEQLELTS
IVQNINPHKTNVIFGDRTKTLWGKDIIEDTIHGIRFAISARSFYQVNPIQTEVLYQQAID
AAELTGEETVIDAYCGIGSISLCLAKKAKHVYGVEIVDQAIQDARANAELNELANTTFET
GKAEEVIPAWYKAGIVADVLVVDPPRKGCDEKLLETILAMKPKKVVYVSCNPGTLARDMK
ILTDGGYVAKKVQPVDMFPMTTHIEAVTVLHLN
NT seq 1362 nt   +upstreamnt  +downstreamnt
ttggaagcatcccttttaaaaaagaaccaatccattgaacttactattgaagatttaacg
catgacggcagtggggttggcaaaattgacggatacccacttttcattccaaatacgtta
cctggcgaaaaagtgacagctaaaataataaagctcaataaaaattacggctttgctcgg
atggagactattgaatcggttagtgcagaccgcgtagaacctccatgtgcggtttattcc
aaatgtggcggttgtagcttgcaacacttaagctacgatggccagcttgaattcaaacga
aatcaagtggaagaaacgatgaaacgtattggcaaactaaacgtagaagttcctgaaaca
ctaggcatggaaaacccgtggcgctaccggaataaatcacaagtaccagtaggatttgtt
aatggtaagttaacagcaggtttttaccaaaaaagaagccatgccattatcgacatgtcc
acttgtttaattcataatgagcaaggtgattttgctgttcaaaaaacacgtgaaatccta
gctaaatacggaacagagccttatgatgaacaaacaggaaaaggcgatatccgccatatt
atgacaagatttgcgcatacaactggacagttaatgattgtccttgtaacaacaaaagaa
cgtatgccatttaaagaagaaatcgtacgggaattggtcgaacaattggaattaacctcg
attgttcaaaatattaatccacataaaacaaatgtgatttttggagatcgtacgaaaaca
ctttggggaaaagatatcattgaggatacgattcatggcattcgatttgcaatttcggct
cgttcattttatcaagtaaacccaatccaaacagaagttttgtatcaacaagcaatcgat
gcggctgagttaacaggagaagaaacagtgattgacgcctattgcggcattggttctatt
tctctttgtctcgcgaaaaaagccaagcatgtctacggggtagaaattgtggatcaagcg
atacaagatgctcgtgcaaatgcagaactcaatgaattagcgaatactacttttgagaca
gggaaagcagaagaggttattccggcgtggtacaaagctggaattgtagcagacgtctta
gttgtcgatccaccacgaaaaggttgcgatgaaaaattactggaaacaattttagcaatg
aaaccgaagaaagtagtgtatgtttcttgtaatccagggacattagcccgtgatatgaaa
atcttaacggatggcggctatgtagcgaaaaaagttcagcctgtagatatgtttccaatg
acaacacatatagaagctgtgactgttctacatttaaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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