KEGG   Listeria monocytogenes ATCC 19117 (serotype 4d): LMOATCC19117_2769
Entry
LMOATCC19117_2769 CDS       T02239                                 
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
lmoa  Listeria monocytogenes ATCC 19117 (serotype 4d)
Pathway
lmoa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lmoa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LMOATCC19117_2769 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmoa03019]
    LMOATCC19117_2769 (recQ)
   03400 DNA repair and recombination proteins [BR:lmoa03400]
    LMOATCC19117_2769 (recQ)
Enzymes [BR:lmoa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LMOATCC19117_2769 (recQ)
Messenger RNA biogenesis [BR:lmoa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     LMOATCC19117_2769 (recQ)
DNA repair and recombination proteins [BR:lmoa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LMOATCC19117_2769 (recQ)
SSDB
Motif
Pfam: RQC HRDC DEAD Helicase_C RecQ_Zn_bind Helicase_Sgs1 ResIII zf-CXXC
Other DBs
NCBI-ProteinID: CBY71668
Position
complement(2847445..2849217)
AA seq 590 aa
MIEQARAILQQNFGYQDFRNGQVDVISKLCAGEDTLAIMPTGGGKSLCYQIPALLFDGLT
IVVSPLISLMKDQVDALVSEGIAATFINSTLTNREIDIRLDAAFSGELKMLYIAPERIET
PGFQRLIEQVPISLFAIDEAHCISQWGHDFRPSYLTLCDSLDKMTRRPLVIALTATATQA
VSDDICRLLKIGADSVVKTGFSRDNLAFQVVKGQDKDKYLIDYLTKNVTESGIIYASTRK
EVERLHTFLLKKGVESGMYHGGMTDLARKDWQEKFLYDDIRVIVATNAFGMGINKSNVRF
VIHYNIPRNIEAYYQEAGRAGRDGVPSDCILLFSPQDSRIQQFLIEQSEMDDERKQNEFA
KLRQMTGYGYTEICLQKYIVQYFGDDEENCEKCSNCLDTREATDVTILAQQVFSCIKRMG
ERFGKVLIAKVLTGSADQKVKDWRFDELSTYGLMKDASQKDVLQLIDYLTAEKYLQPTDS
QFPSLKLTDRAVSVLRGELKVERKQAKRAEKVKIDVNSDLFEKLREVRRELAAKHKVPPY
IIFSDETLREMCAYMPQTEDALLEVKGIGAMKRDKYGAEFLAVLQQEASK
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgatagagcaagcaagagctattttacagcaaaactttggttatcaagattttcggaat
ggacaagttgacgtcatttcgaaactttgcgcgggagaagatacgctagcaatcatgcca
acgggcggcgggaagtcactttgttaccaaatcccagcacttctttttgacggtttgacc
attgttgtttctccactaatttcacttatgaaggatcaggtagatgcgctagtctcagag
gggattgcagctacttttattaatagtacactgactaatagagaaatagatattcgactg
gatgctgcattttcaggtgagttaaagatgctttacattgctccagaacgcattgaaacg
ccaggttttcagcgtttaattgagcaggtacctatttcattatttgcgatagatgaggcg
cactgtatttcgcagtggggtcatgattttcgtcctagctacctgacgctgtgcgatagt
ttggataaaatgaccagacgtccgctcgttatcgcgcttactgcgacagcgacgcaggct
gtttcagacgatatttgccgattgctaaaaataggagcagattcagtcgttaaaactgga
ttttccagagataatttggcttttcaagtagtgaaagggcaagataaagataagtatttg
attgattatttaacaaaaaatgtaacggaatccggaattatttatgcttcgactcggaaa
gaagtagagcggctgcacactttcttgctaaaaaaaggtgttgaatctggtatgtatcat
ggcggaatgaccgatttagcacggaaagactggcaagagaagtttctatatgatgatatt
cgagtgattgtggcgacgaacgcgtttggaatgggaattaataaatctaatgtgcgtttt
gttattcattataatattccgcgcaatattgaagcgtactatcaagaggcgggtcgtgct
gggcgagacggggttccaagtgattgtatcttgttgttttccccgcaagatagccgcatc
cagcagtttttaattgaacaatccgaaatggacgatgagcgcaaacaaaatgaattcgcc
aagctacgccaaatgacagggtatggttatacggaaatttgtttacagaaatacatcgtg
cagtattttggagacgacgaggaaaactgcgagaaatgtagtaattgcttagatacaagg
gaagccacggacgttacaattttagcgcaacaagttttttcttgtataaaaagaatgggt
gagcgttttgggaaagtattaattgccaaggttttgacaggttctgctgaccagaaagtg
aaagattggcgctttgacgaactcagtacttatggattgatgaaagatgcttcccaaaaa
gatgtgttacaactaattgattaccttacagcagaaaaatatttacaaccaactgatagc
caatttccttccttaaaactgacggatagagccgtttcggttttacgaggcgagctaaaa
gtggaaagaaaacaagcgaaacgggctgaaaaagttaaaatagatgtaaatagtgacctt
ttcgagaagttgcgggaagtgcggcgggaactggcagcaaaacacaaggtgccgccatat
atcattttttcagatgaaacgttacgtgaaatgtgtgcatatatgccgcaaacggaagat
gcactgcttgaagtcaaaggcattggtgcgatgaaacgcgataaatatggtgcagaattc
ttggctgtactgcaacaagaggcatcgaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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