KEGG   Listeria monocytogenes SLCC5850 (serotype 1/2a): LMOSLCC5850_1629
Entry
LMOSLCC5850_1629  CDS       T02223                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
lmoc  Listeria monocytogenes SLCC5850 (serotype 1/2a)
Pathway
lmoc03030  DNA replication
lmoc03410  Base excision repair
lmoc03420  Nucleotide excision repair
lmoc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lmoc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LMOSLCC5850_1629 (polA)
   03410 Base excision repair
    LMOSLCC5850_1629 (polA)
   03420 Nucleotide excision repair
    LMOSLCC5850_1629 (polA)
   03440 Homologous recombination
    LMOSLCC5850_1629 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lmoc03032]
    LMOSLCC5850_1629 (polA)
   03400 DNA repair and recombination proteins [BR:lmoc03400]
    LMOSLCC5850_1629 (polA)
Enzymes [BR:lmoc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LMOSLCC5850_1629 (polA)
DNA replication proteins [BR:lmoc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     LMOSLCC5850_1629 (polA)
DNA repair and recombination proteins [BR:lmoc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     LMOSLCC5850_1629 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LMOSLCC5850_1629 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_5 CTD1 Enkurin LTD XPG_I HHH_2 FeoB_N
Other DBs
NCBI-ProteinID: CBY52098
Position
complement(1603828..1606485)
AA seq 885 aa
MNDNIEEDIPVNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKP
SHVLVAFDAGKTTFRHTTFKGYKGGRQKTPSELSEQFPFIRELLTAYDIPQYELANYEAD
DIIGTLTKKAEADGMEVAIITGDRDLTQLASEKTTVYITKKGIADMETNTPETLKEKYNL
TPEQIIDMKGLMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKV
LENKELAILSKELATINVDSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTP
EESKELKELFFEIVTELKEQHFGGKTALYVELENDNYHTANFIGLTVHSSQGTYFFTKET
AESSEAFRKWVESDQTKVVYDAKKTIVAMNRIGLAISGITFDIMLASYLLNPSDSIDDFT
SVAVRHDYTEVETDEAVYGKGAKRSTPEESIVAAHLARKAVAIADLEKRLVDDLEKNEQL
ALMEDLELPLTFVLAEMEMQGVSVDTDRLEDMKVELGGRLKTLEASIHSLAGEEFNINSP
KQLGVILFEKLELPPVKKTKTGYSTAADVLESLSGKHAIIDEILLYRQLGKIQSTYIEGL
LKVTDKETHKVHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFVPSKPGWKMFS
ADYSQVELRVLAHISEDENLIYAFKHDYDIHTKTAMDVFHVEKEEVDSLMRRQAKAVNFG
IVYGISDYGLSQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRR
YIPEIVSRNFNVRGFAERTAMNTPIQGSAADIIKKAMILMSERLVSEKLEAKLLLQVHDE
LIFEAPEAEIAKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK
NT seq 2658 nt   +upstreamnt  +downstreamnt
gtgaatgacaatatcgaggaggatatccctgtgaataaattagtattaattgatggaaat
agtattgcgaatcgcgctttttatgcgttaccacttttaaataacgataaaggtgtttac
acaaatgcggtgtatggattcgcaatgatgttgatgaatgtactcgaaaaagaaaaaccc
agccatgtgctcgttgcatttgatgctggaaaaacaacttttagacatacaacatttaaa
ggttataaaggcggacgtcaaaaaaccccaagtgagttatctgaacagtttccattcatc
cgagagcttttaacggcgtatgatatcccgcaatatgaactggccaattacgaggcagac
gatattatcggaacattgacgaaaaaagcggaagcagatggaatggaagttgcaattatt
accggagaccgcgatttaacacaattagcttctgaaaaaacaacggtttatattactaaa
aaaggcatagccgatatggaaaccaacacaccagaaacactaaaagaaaaatacaatcta
actcctgaacaaatcattgatatgaaaggtttaatgggagattcctccgataatattcct
gggattccaggcgttggtgaaaaaacagccttaaaactcttacatgaatttggcggaacg
gtggaaagtgtgttagagcacgccgaggaaatttccggtaaaaaactaaaagaaaaagta
ctagaaaataaagaattagctattttaagtaaagagctagctacaatcaatgtggattca
ccgattgaatgcacagtcgaaagcacgaaatatgacgggtatcaaactgaaaaagttatc
cctttattaaaagaaatgaattttacaacacttttgaaaaatatcgaaggagatacaccg
gaggaatcgaaagaactaaaagaattgttttttgaaatagtaacggaattaaaagaacaa
cattttggtgggaaaaccgcactttatgtggagctagaaaatgataattaccatacagca
aacttcatcgggctgacagtacattccagccaaggaacgtatttctttacaaaagaaaca
gctgaaagtagtgaggcattccgcaaatgggtagaaagtgatcaaacaaaagtagtgtat
gatgcgaagaaaacaatagttgcaatgaaccgcattggtttggcaatttctggtatcaca
tttgatatcatgttagcatcttacttgttaaatccatctgattcaattgatgattttaca
agtgttgcagtaagacatgattacacagaagtagaaacagatgaagcagtctacggaaaa
ggtgctaaacgtagcactcctgaagaaagcattgttgcggcacacttagctaggaaagca
gtggccattgctgacttagagaaaagactagttgatgatttagagaaaaatgaacaacta
gctttgatggaagacctagagctaccactaacatttgttttagcagaaatggagatgcaa
ggagtcagcgtagatacagatcggcttgaagatatgaaagtagagctgggtggaagacta
aaaacattagaagcatccattcattcactagctggcgaagaattcaatattaattcaccg
aaacaactaggtgtaattttatttgaaaagctggaacttcccccagtcaagaaaacaaaa
acaggctattcaacagctgcggatgtactggaaagtttgtctggaaaacacgcgattatt
gatgaaattttgttatatcgtcaacttggtaaaattcagtccacttatatcgaagggctg
cttaaagtgacggataaagaaacacataaggtccatacacgtttcaaccaaacattaacg
caaacgggacgtttaagttcagtcgatccgaacttacaaaatatcccgattcgtttagaa
gaaggtcggaaaatcagacaagtttttgtgccgagtaaacctggttggaaaatgttttca
gccgattattctcaagtagagttgcgagttttagcacatatttctgaagatgagaattta
atttatgcatttaagcacgattacgatatccatacgaaaacagccatggacgtgtttcat
gtggagaaggaagaagtggattcactaatgcgccgtcaagctaaagcagtaaactttggt
attgtatatggtattagtgattatgggctttcgcaaaatcttggtattacgcgtaaagaa
gcaaaagactttattgatcgttactttgtgagttatccagccgtgaaagaatatatgcaa
gacattgtccgttttgcgaaagaaaaaggctatgtagagaccattttacatcgtcgtcgt
tatattccggagattgttagtcgtaattttaatgttcgcggatttgcagaaagaactgcg
atgaacacacctattcaaggtagtgccgctgatattatcaaaaaagctatgattctgatg
agcgagcgtttagtatctgaaaaattagaagcaaaattattacttcaagtgcacgatgaa
ttaatcttcgaagcacctgaagctgaaatagctaaattagaagaaattgtcccagatgtt
atggaaaatgcagtagagctttctgtgccgcttaaagtagatagcgcctttggtgacact
tggtacgacgcgaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (23)   

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