KEGG   Listeria monocytogenes J1816 (serotype 4b): LM220_10588
Entry
LM220_10588       CDS       T02776                                 
Symbol
ligA
Name
(GenBank) aromatic ring-opening dioxygenase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
lmoj  Listeria monocytogenes J1816 (serotype 4b)
Pathway
lmoj03030  DNA replication
lmoj03410  Base excision repair
lmoj03420  Nucleotide excision repair
lmoj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lmoj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LM220_10588 (ligA)
   03410 Base excision repair
    LM220_10588 (ligA)
   03420 Nucleotide excision repair
    LM220_10588 (ligA)
   03430 Mismatch repair
    LM220_10588 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lmoj03032]
    LM220_10588 (ligA)
   03400 DNA repair and recombination proteins [BR:lmoj03400]
    LM220_10588 (ligA)
Enzymes [BR:lmoj01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     LM220_10588 (ligA)
DNA replication proteins [BR:lmoj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     LM220_10588 (ligA)
DNA repair and recombination proteins [BR:lmoj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     LM220_10588 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LM220_10588 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     LM220_10588 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      LM220_10588 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT HHH BRCT_2 RNA_pol_A_CTD
Other DBs
NCBI-ProteinID: EGF44721
Position
2267688..2269703
AA seq 671 aa
MADKKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLKIEEAHPEWVTPESPSKR
VGGEVLEGFKKVAHDTPMLSLANAFNQEDLADFDRRIRDKVGDDIAYMCELKIDGLAVSL
QYENGKYKQGATRGDGTIGEDITANLRTIRSIPMKLQKDYSIEVRGEAFMPKRSFQKLNE
IREEEGQMLFANPRNAAAGSLRQLDTKIAASRNLDIFLYAVADFGEMGVETHSAGLDMLE
TLGLKVNKERRLCNSLEEVYAYIEEWTEKRAGLAYDIDGIVLKLNNLEQQRQMGNTVKSP
RWSIAYKFPAEEVPTKLLDIELNVGRTGVITPTAVLEPVRVAGTTVSRASLHNEDLITEK
DIRIGDTVLIKKAGDIIPEVIKSITEKRSGSEEPFHMPKNCPACDSELVRLEEEVALRCI
NPKCPAQIKEGLIHFVSRNAMNIDGLGEKVIIQLFSQHLIKDVADLFFLSKEKLLELERM
GEKSVTNLLASIQASKQNSLEKLLFGLGIRHVGAKAAKSLAIHFDTMDNLKVADKETLTS
INDIGEKMADSIVTYFANEEVHDLLEELKRAGVNMTYTGPKLEDMSEEELVFAGKTVVLT
GKLEKLTRNDAKALIESLGGNVSGSVSKKTDVVVAGSDAGSKLAKAEELAIPIWSEEDLI
EYLPDEGGLNE
NT seq 2016 nt   +upstreamnt  +downstreamnt
atggctgataaaaaaaggtatgaggaactaatcaacatacttgatcagtacagctatgat
tattatgtaattgataatccaacagtagaagatgccgaatacgatcagaagatgcaagaa
ttacttaaaatagaagaagcgcatcccgagtgggttacacctgagtctccgtcaaaacga
gttggcggggaagttttagaaggttttaaaaaagtagcacatgacacgccgatgttaagt
cttgccaacgcttttaaccaagaagacttggcagactttgaccgccgaattcgcgacaaa
gtgggcgatgatattgcttatatgtgcgaacttaaaattgacggactagcagtatccctt
caatacgaaaatggtaaatacaaacaaggtgctactcgtggtgatggaaccattggggaa
gacattactgctaacttgcgtacgattcgctccatcccaatgaaacttcaaaaggactat
tccattgaagttcgcggtgaagctttcatgccaaaacgctccttccaaaaactaaatgaa
attcgcgaagaagaaggccagatgttatttgccaatccacgaaatgctgcggctggctcg
cttcgacaattggacacaaaaatcgcagcgtcgagaaatctcgatatcttcctttatgca
gtagcagattttggtgaaatgggcgttgaaactcatagcgcaggcttagatatgcttgaa
acacttggtcttaaagtcaataaagaacgccgactttgcaacagtttagaagaagtttat
gcgtacattgaagaatggacagaaaaacgcgccggattagcatacgatattgacggcatt
gttttaaaattaaacaacttagagcaacaacgccaaatgggaaacaccgttaaatcgcct
cgttggtcgattgcttataaattcccagccgaagaagtaccaactaagttactcgatatc
gaattaaatgttggtagaactggtgtgataactcccaccgccgtgttagaaccagtgcga
gtggcagggacaaccgttagccgcgcttcgcttcataatgaagacctaattacagagaaa
gatatccgcattggcgacaccgttttaatcaaaaaagctggcgatatcattccagaagtc
attaaaagcatcaccgaaaaacgtagcggaagtgaagaacctttccatatgccaaaaaat
tgtccagcgtgcgatagtgaattggttcggttagaagaagaagtggcgttaagatgtatt
aatcctaaatgcccagctcaaataaaagaaggacttatccactttgtctccagaaatgcg
atgaacattgatggcctcggcgaaaaagtaattatccagctattttcacagcatttaatt
aaagatgtagcagatttgtttttcctttcgaaggagaaactgttagaattagaaagaatg
ggtgagaaatcggtaactaatttactggcatccatccaagcaagtaaacaaaactcgctt
gaaaaattacttttcggcttaggcattcgccatgttggtgcaaaagccgccaaatcactt
gccattcatttcgatacaatggataatttgaaagtagcagacaaagaaacactgacaagt
attaacgacattggtgaaaaaatggcagacagtattgtcacttatttcgcgaatgaagaa
gtacatgatttattagaagaactaaaaagggctggcgtcaatatgacctatacagggcca
aaactagaagatatgtccgaggaagaacttgttttcgcaggtaaaaccgttgtcttaact
gggaaactagaaaagttaacgcggaatgatgcaaaagcattaatcgaatccctcggagga
aatgtttctggaagcgtcagtaagaaaacggatgttgttgtagctggcagtgatgctggt
tctaaattagccaaagcggaagaactagccattcctatttggtcagaagaagacttaata
gagtacttaccagacgaaggtggattaaacgaatga

DBGET integrated database retrieval system