KEGG   Listeria monocytogenes SLCC7179 (serotype 3a): LMOSLCC7179_1498
Entry
LMOSLCC7179_1498  CDS       T02224                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lmos  Listeria monocytogenes SLCC7179 (serotype 3a)
Pathway
lmos03410  Base excision repair
lmos03430  Mismatch repair
lmos03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lmos00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LMOSLCC7179_1498 (recJ)
   03430 Mismatch repair
    LMOSLCC7179_1498 (recJ)
   03440 Homologous recombination
    LMOSLCC7179_1498 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lmos03400]
    LMOSLCC7179_1498 (recJ)
DNA repair and recombination proteins [BR:lmos03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     LMOSLCC7179_1498 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     LMOSLCC7179_1498 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      LMOSLCC7179_1498 (recJ)
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1
Other DBs
NCBI-ProteinID: CBY60704
Position
complement(1505721..1508156)
AA seq 811 aa
MLAFFYWKIPLGFSSDFRYNRKVERWGNVIHSKYLWNIEEAAEDKASQLAEQLKISLPLA
KLLWKRKITTQGQFDKFFHPEKYESYDPFLFAEMDLAVARIKQAIELNEQILVYGDYDAD
GVTSIAVLMKTLRHLGADADFYIPNRFTEGYGPNIAAFDMAKNQGTDLIITVDNGIAALE
VMAHAKEIGLDVIVTDHHEPREIMPEAVAVIHPKHPKSAYPFDELAGVGVAYKLSHALLG
EEPKELLDLVAVGTVADLVSLTDENRLLVQLGLRQLRESANLGLAVLAKKASLKLEEATE
ETIGFGLAPRLNAVGRLGPADPAADLLLTEDPEEALFLAEEIDDANKERKQIVVDTTKLA
MEAIEAKDTLGNVLVVYGEGWNTGILGIVASKLVGTYSRPAIVLGIDPVTGIAKGSGRSV
DAFHLYQALDKHRDLMMAFGGHPMAAGLTLPAENLTELEAKLQEEASYLSEEDFRPALKI
EEKIKLADVSVAFIAQLEKLAPFGMDNPKPIFLLENMHLKGTKRIGADKTHLKTMLATEE
NDATLDSIGFGVGDLVDKISPTAAVDVVGELSINEWNNVKKPQLRMMDIHISHWQLFDVR
NKSEWARILQEQTESRVFVCFEERTIGTLGEQNYILVNEKADFVADFQTEELVFADMPTN
IELVETIVRETKPERIFVHFDAAEGNQIPAIPDRLAFAELYSLIKKFQPFPIEKYTPRLM
QKFGWNKEQIDFMSKVFFDLEFAKMDSGQIIINEVVEKRNLDESLVYQQKVEEITTRKKL
LYSNYTELHSWMKSMMETSIYPNAEELENGN
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgttggcgtttttttattggaagattcctcttggtttttctagtgattttcgatataat
aggaaggttgagaggtggggtaatgtgattcattcaaaatacttatggaatatcgaggaa
gcggcggaagataaagcaagtcaattagcagaacagctaaaaatctcgcttccacttgca
aaactactttggaaaagaaaaattacaacgcaaggacaattcgataaatttttccaccca
gaaaaatatgaaagctatgacccgtttttattcgcagagatggatcttgcggttgctaga
attaagcaagcgatagaactaaatgagcagattttagtttacggagattatgatgcagat
ggggttactagtattgcagttttaatgaaaacattgcggcatttaggagccgatgctgat
ttttatattcctaatcgctttacggaaggttatggcccgaatattgccgcttttgatatg
gctaaaaaccaaggaacagatttaattattacggttgataatggtattgcggcgcttgaa
gtaatggctcatgccaaagagattggtttagatgttattgttacggatcaccatgaaccg
cgtgagattatgccagaagctgtggctgttatccacccaaagcatcctaaatcagcttat
ccgtttgatgaactagcgggtgtgggtgttgcttacaaattatcgcacgctttacttgga
gaagagccaaaagaactgctcgatttagttgcagttgggactgtggcagatttagtttct
ttaacagatgaaaatcgcttacttgttcaactgggattgcgtcaattacgcgaatccgcc
aaccttggactggctgtgctagctaaaaaagctagtttgaaattagaagaggctacggaa
gaaacgattggctttggtttggcaccacgactgaatgcagttggtcgattaggcccagca
gatccagcggctgatttacttttaacggaagatccagaagaggcacttttcttagcggaa
gaaatcgatgatgcgaataaggaacggaaacaaatagttgttgatacaacaaagctcgcg
atggaggcaattgaggcaaaagacactttaggaaatgtgctcgttgtttacggtgagggg
tggaataccggaatccttggaattgttgcttctaaattagttggaacatattctcgaccg
gcaattgtgttggggattgatcctgtaaccggaattgctaaagggtctggtcgaagtgtg
gacgcgtttcatttatatcaagcgcttgataaacatcgtgatttaatgatggccttcggt
gggcatccaatggctgcaggccttacattgccagccgaaaacctaactgaattagaagct
aaattacaagaagaagcgagttatctttcagaagaagattttcgcccggccttgaaaata
gaagaaaaaattaagcttgctgatgtttcggtggcctttattgctcaacttgaaaaatta
gcgccttttgggatggataatcctaaaccgattttcttgttagaaaacatgcatttaaaa
ggaacgaaaagaattggggcagataaaacccatttaaaaacaatgctcgccacagaggaa
aatgatgccactttagactctattggatttggcgtaggagatttggtagataaaatttct
ccgacagcagccgtggatgtggttggagaattgtccatcaatgaatggaacaatgtgaaa
aaaccgcaactacgaatgatggatattcacatttcgcactggcaactctttgatgtacgt
aataaatcagagtgggctaggatactccaagaacaaacagaatcaagagttttcgtttgt
tttgaagaaagaacgattggtacgcttggagaacaaaactatattttggtgaatgaaaaa
gctgattttgtggcagatttccagacagaagaacttgttttcgcagatatgccaacgaat
atcgaattagttgaaacgattgttcgcgaaacgaaaccagagcgtatttttgtccatttt
gatgcagcagaaggtaatcaaatcccggcaataccagaccggttagcttttgcagaatta
tatagtctcattaaaaaattccaaccatttccaatcgaaaagtacacaccacggctaatg
caaaaatttggttggaataaagagcaaatagatttcatgtcaaaggtgttttttgattta
gaatttgctaaaatggatagtggtcagattattatcaatgaagttgttgaaaaacgtaat
ctggacgagtcacttgtttatcaacaaaaggtagaagaaataactacaagaaaaaaactg
ttgtactccaattatactgagcttcatagttggatgaaatcaatgatggaaacatcaatt
tacccgaatgcggaggaactagaaaatggaaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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