KEGG T02241: LMOSLCC2479

Listeria monocytogenes SLCC2479 (serotype 3c): LMOSLCC2479_0006

Entry

LMOSLCC2479_0006  CDS       T02241

Symbol

gyrB

Name

(GenBank) DNA gyrase, B subunit

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

lmoy Listeria monocytogenes SLCC2479 (serotype 3c)

Brite

KEGG Orthology (KO) [BR:lmoy00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lmoy03032]
    LMOSLCC2479_0006 (gyrB)
   03400 DNA repair and recombination proteins [BR:lmoy03400]
    LMOSLCC2479_0006 (gyrB)
Enzymes [BR:lmoy01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     LMOSLCC2479_0006 (gyrB)
DNA replication proteins [BR:lmoy03032]
Prokaryotic type
  DNA Topoisomerases
   LMOSLCC2479_0006 (gyrB)
DNA repair and recombination proteins [BR:lmoy03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      LMOSLCC2479_0006 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 TOPRIM_C GyrB_hook

Other DBs

NCBI-ProteinID:

CBY56277

Position

6030..7970

AA seq 646 aa
MSEENITNVQENASDYNEDQIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVWEIVDNAIDE
ALAGFCTEIEITIEADNSITVRDNGRGIPTGINEKIGRPTVEVIFTVLHAGGKFGGGGYK
VSGGLHGVGASVVNALSTSLEVYVHREGQKYYQRFERGDVVMDMEEQGETDYRGTIVHFT
PDPQIFTETTEFDFDTLRTRTRELAFLNRGLTISIEDKREEHKVRKDFHYEGGIRSYVEH
LNKAKDVIHEPPIYLEGERDDIMVEISMQYNTGFSSNIISFANNIHTYEGGTHESGFKTA
LTRVINDYARRNKLFKDSDDNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARSI
TDKLFSEALNKFMMENPDVAKKIVEKGVVASRARLAAKRAREVARKSSGLEISSLPGKLA
DCSSRNPEISELYIVEGDSAGGSAKQGRDRLFQAILPIRGKILNVEKARLDRILANEEIR
TIFTAMGTGFGGDFDVSKSRYHKLIIMTDADVDGAHIRTLLLTLFYRYMRPLLDAGYIYI
AQPPLYQIKHGKQIEYVYSDGQLEDYLASLDGDTKYSIQRYKGLGEMNPEQLWDTTMNPE
HRTLLQVNIKDAIDADETFEMLMGDRVEPRRKFIEDNAQYVKNLDV

NT seq 1941 nt +upstreamnt +downstreamnt
atgtcagaagaaaatattacaaatgtacaagaaaatgcttcagattataacgaagatcaa
atacaagtactggaaggcctagaggcagtaagaaaaagacccggtatgtacattggttca
actagccaacgcgggctccatcaccttgtatgggaaattgttgataatgcaattgatgaa
gcacttgctggtttttgtacagaaattgaaattacaattgaagctgataacagcattact
gttcgcgataacggacgtggaattcctacagggattaatgaaaaaatcggtcgtccaaca
gtagaagtaatctttaccgttctgcatgctggtggtaaatttggcggcggcggatataaa
gtatctggcggacttcacggagttggtgcatcggtagttaatgccctttccacatctctt
gaagtatacgttcaccgtgaaggtcaaaaatattaccaacgctttgaacgtggtgatgta
gtaatggatatggaagaacaaggcgaaacggattatcgtggaacaattgttcactttaca
ccagatccacaaattttcacagaaacaacggaattcgattttgatacgcttcgtacgcgt
acacgcgaacttgctttcttgaatcgtggtttaacgatttcaattgaagataagcgcgaa
gaacacaaagttcgtaaagatttccactatgaaggcggaattcgttcttacgtggagcat
ttaaataaagcaaaagacgttatccatgagccaccaatttatttggaaggtgaacgcgat
gatattatggttgagatttccatgcaatataatactggattctcaagcaacatcatttca
ttcgcaaataacattcatacgtatgaaggcggaactcacgaatctggctttaaaacggcg
ttaacacgtgttattaatgactacgcgcgtcgtaataaattgtttaaagatagtgatgac
aatctttctggtgaagatgttcgtgaaggtttaacggcgattatttctatcaaacaccca
gatccacagtttgaaggacaaaccaaaacaaaacttggaaattcagaagcccgttcaatc
acggataagctattttctgaggctttaaataaatttatgatggaaaacccagatgttgct
aaaaaaatcgttgagaagggcgttgtggcttctcgtgcacgtctggctgctaagcgcgcg
cgtgaagttgctcgtaaaagcagtgggctagaaatttctagcttgccaggtaaattagct
gactgttcttcccgtaatcctgaaatcagcgaactttacatcgttgagggtgactcagct
ggtggttcagctaaacaaggtcgtgaccgtttattccaagcgattttgccgattcgtggt
aaaattttgaacgtggaaaaagcacgtttagaccgtattctagctaacgaagaaattcga
actatttttacagcgatgggtactggttttggtggcgattttgacgtttctaaatctcgt
taccacaaattaattattatgactgatgccgatgttgatggtgcacatattcgtacacta
cttcttacactattttatcgttatatgcgtccactgcttgatgctggttatatctatatt
gcgcaaccaccgctttaccaaattaagcatggtaaacaaatagaatatgtatacagcgac
ggacagttagaagactatctggcttcccttgacggagacactaaatacagcattcaacga
tataaaggtcttggagaaatgaacccagaacaactttgggatacaacaatgaatccggaa
caccgtacactacttcaagtcaatatcaaagacgctattgatgccgatgaaacttttgaa
atgttgatgggtgaccgcgtggaacctcgtcgtaaattcatcgaagacaacgcgcaatac
gttaaaaacttggatgtttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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