KEGG   Listeria monocytogenes J1-220 (serotype 4b): LM1816_17445
Entry
LM1816_17445      CDS       T02801                                 
Name
(GenBank) RecQ family ATP-dependent DNA helicase
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
lmoz  Listeria monocytogenes J1-220 (serotype 4b)
Pathway
lmoz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lmoz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LM1816_17445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmoz03019]
    LM1816_17445
   03400 DNA repair and recombination proteins [BR:lmoz03400]
    LM1816_17445
Enzymes [BR:lmoz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LM1816_17445
Messenger RNA biogenesis [BR:lmoz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     LM1816_17445
DNA repair and recombination proteins [BR:lmoz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LM1816_17445
SSDB
Motif
Pfam: DEAD Helicase_C ResIII RecQ_Zn_bind AAA_22 NAD_binding_9
Other DBs
NCBI-ProteinID: AGR29597
Position
complement(2090506..2091909)
AA seq 467 aa
MNLEKELKEYLGFDEFRPGQKEVIETALAKRNCFAMLPTGTGKTICYQLAGHLMDGLVLI
VSPLLSLMQDQMERMRAHGEKRVAALNSFLKREEKGQVLANIHLYKFIFLSPEMLNNETV
KNLLLKQRISLFVIDEAHCISQWGHDFRPDYLMLGKFIQEAEFPVTMVLTATATKKVRAD
ILTQLHLTDCVQIVYSVNRPNISLQVEKFSNQHVKKDRLYALVRKLQTPGIIYFSSKKLA
ESIAHELSEIADLRVAYYHGDMDTEDRIIIQQQFVYGQLDVICATSAFGMGIDKADIRYV
IHYHMPADLEAYLQEIGRAGRDGENSVAILLYANGDEFIQMQLADQDIPDANLMNLTNEQ
RKTLPETEQRFIEYYQRSGLSTKELTDKMDYRKKWKRANLQQFIGYLHTTDCRRNYILRY
FEETPLEVTPENCCDLDGAEIIDFEKRPITQQKEIPTWEAYLAYLLQ
NT seq 1404 nt   +upstreamnt  +downstreamnt
gtgaacttagaaaaggaattaaaagaatatcttggttttgatgagttccgccctggccaa
aaagaagtaattgaaacagctttagcaaagcgaaattgttttgctatgttacctactgga
acaggaaaaaccatttgttatcaattagcgggtcatttgatggatggattagtattgatt
gtttctccacttctctcccttatgcaagatcaaatggagcgaatgcgtgctcacggagaa
aagcgagtagcagcgcttaatagctttttaaaacgagaagaaaaagggcaagtccttgca
aacattcatttatataaatttatttttttatcaccagaaatgctaaataatgaaacggtg
aaaaacttactattaaaacaaagaatcagcttatttgtcatagatgaagcgcattgcatt
tcgcagtggggacatgattttcgccctgattatttgatgttaggtaagttcattcaagaa
gccgaatttcctgtgactatggtgctgacagctacggcaaccaagaaagttagagcagat
attttaacgcaattacatctaacggattgtgtgcaaattgtttattctgttaatcgaccg
aatatttctttacaagtggagaaattttctaaccagcatgtaaaaaaagaccgtttatat
gcgcttgttcgcaaactacaaacacccggaattatttatttttctagtaaaaaattagcg
gaaagcattgcgcatgaattaagcgaaattgctgatttaagagtagcttattatcacggg
gatatggatacagaagatagaattattattcagcaacaatttgtttacgggcagctggat
gttatttgcgccactagcgcatttggaatggggatagataaagctgacattcgctatgtt
attcattatcatatgcctgcagatttggaagcatatttgcaagaaattggtcgagcaggt
cgtgatggcgaaaacagtgtggcgattctcttatacgcgaatggagatgaattcattcaa
atgcaattagccgatcaagatatcccagatgccaacttaatgaatctgacgaatgaacaa
cgcaaaacgttacctgaaacagagcaacgttttattgaatactaccaaagaagtggttta
agtacgaaagaattaaccgacaaaatggattatcgaaaaaaatggaagcgggctaattta
caacaatttattgggtatctgcatacaacggattgtcgccgtaattatattctacgatac
tttgaagaaacgccgttagaagtcaccccagaaaactgttgtgatttggatggagcagaa
ataatcgattttgaaaaaagaccaataacacagcaaaaagaaattccaacatgggaagct
tatttagcttatttattgcaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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