KEGG   Candidatus Lokiarchaeum sp. GC14_75: Lokiarch_03470
Entry
Lokiarch_03470    CDS       T04015                                 
Name
(GenBank) coproporphyrinogen III oxidase
  KO
K07739  elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
Organism
loki  Candidatus Lokiarchaeum sp. GC14_75
Brite
KEGG Orthology (KO) [BR:loki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:loki03016]
    Lokiarch_03470
Enzymes [BR:loki01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.311  tRNA carboxymethyluridine synthase
     Lokiarch_03470
Transfer RNA biogenesis [BR:loki03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    Lokiarch_03470
SSDB
Motif
Pfam: Radical_SAM_C Radical_SAM ATP-synt_ab_C
Other DBs
NCBI-ProteinID: KKK46205
UniProt: A0A0F8WDK1
AA seq 540 aa
MSDSTNNENESEISREVINYLIKNPQTPRYKITNIKGRIGKKYMYHKVIKNATILSFATE
EEKKIVTRILKRKTTRTLSGVSVIAIMTKPLPCPGTCIYCPGQESQPGEKVAQSYTGQEP
AAMRSIHNNYNPYSQVLSRIKDLEVIGHTIDKIELIIMGGTFLSTDVKYQEDFVKGALEG
IIEKRVKNLEEAKREAEKSRKRVIGITIETRPDYCKETDVDRMLKYGTTRVELGIQTLNN
EIYELVKRGHSTKDSIEAIRIAKDAGLKVNVHMMPNLPGASLETDLEMFNSLFSNPDYRP
DMLKIYPTLVIKGTGLYDWWKQGKYTPFSDSELVNLIASIKQNLPSYVRIQRIMRDIPAN
LIEAGSKKSNLRQYIQERLEKIGKKCNCIRCREYGIKLKGKVIEKNSFDNIQLYRFDYEA
SKGKEIFLSYENKKEGYLLGYLRLRKPSELGHRPELSDGNTMIVREVKIVGELVPKDSKP
ERNLQIQHRGYGKMLMKNAEKISIEDFDAKKLAVISGIGARDWFYGIGYKLDGIYVSKFL
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgagtgactcaacaaataatgaaaacgaaagtgaaatctcaagggaagtaataaattat
ttaataaaaaacccacaaactccacgctataaaattacaaacataaaggggcgaatcgga
aaaaaatatatgtatcataaagttatcaagaatgctacaatccttagttttgccacagaa
gaagagaaaaagattgtaactcgaattcttaaaagaaaaacaaccagaaccctatctggt
gtttctgtaatcgctattatgactaagccacttccatgtccgggtacttgtatttattgc
ccaggacaggagtcccaaccaggagaaaaagtagcacaatcctataccggtcaagaacct
gctgctatgaggtctatccataataattataatccatactcccaagttcttagccgaatt
aaagatttagaagtaataggtcataccattgataaaatagaactcataattatgggaggg
actttcctatcaacagatgtgaaatatcaagaagattttgttaaaggggcattggaagga
ataattgaaaagagagtaaaaaatttggaagaagctaagagagaagctgaaaaatctagg
aagcgagtcattgggattacgatagaaacaagaccagattattgtaaagagactgatgta
gatagaatgcttaaatacggaactactcgcgttgagttaggtatacagactttaaataac
gagatctatgagttggttaagagaggtcactcaaccaaggatagcattgaagcaattaga
atcgcaaaagacgcgggtcttaaggttaatgttcatatgatgcctaatttgccaggtgcg
agcctcgaaactgatttagaaatgtttaactcattattttcaaacccagattatcgccca
gatatgttaaagatctacccaacattagttataaaaggaactgggttatatgattggtgg
aagcaagggaaatacacacccttttctgatagtgagttggttaatttaatagcgagtata
aagcaaaatttaccttcttatgtcagaatccagagaattatgagagatattcctgcgaat
ttgatagaagcagggagtaaaaaaagcaatttaaggcaatatattcaagaaaggttggaa
aaaataggaaaaaaatgtaattgtattagatgtcgtgaatatggtattaaattaaaagga
aaagttattgaaaaaaactcgtttgacaatatacaattatatcgatttgattatgaagca
tccaaaggaaaagaaatattcctgtcttatgaaaacaagaaagaaggatatttacttgga
tatcttcgtttaaggaaaccgtctgaattaggtcatagacctgaactgagtgatggaaat
accatgattgttcgagaggttaaaatagtaggagaattagtcccaaaagattccaaacct
gaaagaaatctccaaattcaacatagaggatatgggaaaatgctaatgaaaaatgctgaa
aaaatatcaattgaggattttgatgccaaaaaattagcagtaattagcgggattggtgct
agagattggttttatggcataggatataaattggatggaatttatgtttcaaagtttctt
taa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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