KEGG   Limosilactobacillus oris: AYI71_02350
Entry
AYI71_02350       CDS       T04391                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
lor  Limosilactobacillus oris
Brite
KEGG Orthology (KO) [BR:lor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lor03009]
    AYI71_02350
Enzymes [BR:lor01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     AYI71_02350
Ribosome biogenesis [BR:lor03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    AYI71_02350
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AMS07748
Position
493023..493952
AA seq 309 aa
MTDKIRWKIEEHLPENQARCSLRTLLHDQWLLPNRYVHFLRRRHHVLLNGRYAYMNTAVA
ARDRVTLAFNGDEFRTPAANDYRPTSAPQVRVLFENRDLVVVNKPQGQKSHPNYHGETGT
LMNDVAGYLTAKNCGAFMVHRLDQETSGAMIIAKNPVVVPVLNRLISSGQIHRRYLAVVA
GNLTGRGKFTEPLGKDPRDVRKYCVAGENAKPAQTNYQVLASRHNRTLVLLQLATGRTHQ
LRVHLAYHGHPIIGDPLYGRDSSSRMLLHGAKQELVLPFSFKRIQVTAPLPSYFTDYLVK
YDLEKLDCK
NT seq 930 nt   +upstreamnt  +downstreamnt
atgacggacaaaattcgctggaaaattgaggagcacctgccggagaaccaggctcgttgc
agcctccggactttactgcatgaccagtggctgttgccgaaccgctatgttcactttttg
cgccgccgtcaccatgtcctactaaatggtcgctatgcctatatgaatacggcggtcgca
gctagggaccgggtgacgctggcttttaacggggatgagttccgaaccccggcggcaaat
gattaccgaccgaccagtgcaccacaggttagggtcctgtttgaaaatcgtgacctggta
gtggtcaataagccgcaaggacaaaagagccacccaaattatcacggcgaaacggggacg
ctgatgaacgacgtagcgggctacctaacggcaaagaattgcggagcctttatggtccac
cgccttgaccaggagactagcggggcaatgattattgctaaaaatccggtggttgtgccg
gtcctcaaccgcttgatcagctccgggcaaattcaccgtcgttacctggcagtggttgcc
ggcaacctgaccggccggggaaagtttactgaacccctgggcaaggatccacgggacgtg
cgtaagtattgcgtcgctggcgaaaatgccaaaccagcgcaaaccaactaccaggtgctg
gcaagccggcacaatcgcacgctcgtcctcctgcagctcgcaacgggacggacccaccag
ctccgggtccaccttgcctaccatgggcacccgattattggtgaccccttgtacggccgg
gatagttcttcacggatgctgctacacggcgccaaacaggaattggtcctgcccttttct
tttaaaagaattcaggttacggcacctttgccgtcctattttacggattatctggtaaaa
tacgacttagaaaagttagattgcaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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