KEGG   Lacticaseibacillus paracasei subsp. paracasei: LBPC_0827
Entry
LBPC_0827         CDS       T04768                                 
Name
(GenBank) pseudouridine synthase
  KO
K06183  16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Organism
lpap  Lacticaseibacillus paracasei subsp. paracasei
Brite
KEGG Orthology (KO) [BR:lpap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lpap03009]
    LBPC_0827
Enzymes [BR:lpap01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.19  16S rRNA pseudouridine516 synthase
     LBPC_0827
Ribosome biogenesis [BR:lpap03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    LBPC_0827
SSDB
Motif
Pfam: PseudoU_synth_2 S4 GDC-P
Other DBs
NCBI-ProteinID: BAN71123
Position
877126..877836
AA seq 236 aa
MRLDKYLSHLQFGSRKEVKALIRDKRVRVAGDLITDPGYNVLPGIAVEVNDAQADGPLEV
DYLMNKPAGVITATEDPTQSTVLDLIRPHDYRPGLYPVGRLDKDTTGLLLLTTDGNLGHA
LLSPNRHIAKTYAATLAKTLTADMKQRLETGIDLKDFTTAPAQVVVLPDTDGKRIQITIT
EGKFHQVKRMLLAVDNEVTALTRIAMGPLSLPADLAAGEYQALTDDERTDLDNITR
NT seq 711 nt   +upstreamnt  +downstreamnt
atgcgattagataaatatttgagtcatttacaatttggtagtcgaaaagaagttaaggca
cttattcgcgacaagcgggtacgtgtggccggtgatttaatcactgatcctggttacaat
gtgttgccggggatcgcggtcgaggtgaacgatgcccaagcggatgggccgcttgaggtc
gattatttgatgaacaaaccggccggggtgattaccgcaacagaagatccaacgcaatca
acggtgctggatctgatccgaccacatgattaccgaccgggtttatatcccgtaggtcgt
ctggataaagacactactggtctgttgttacttacgaccgatggcaatttaggtcatgca
ctgctttcgcctaatcgtcatattgccaaaacctatgctgcaactttggctaagacatta
actgctgacatgaagcagcgactcgaaaccggcattgatttaaaggacttcacaaccgcc
ccggcacaagtcgttgttttgccggataccgatggcaaacgcatccagattacaatcacg
gaaggtaagtttcatcaagtcaagcgcatgctgttggcagttgataatgaggtgacggcc
ttgacgcgaattgctatgggaccattgtcattgccagccgatttagctgctggggagtat
caggctttaaccgatgacgaacggaccgatttggataatatcactcgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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