KEGG   Secundilactobacillus paracollinoides: AYR62_07770
Entry
AYR62_07770       CDS       T04675                                 
Name
(GenBank) DNA mismatch repair protein MutS
  KO
K07456  DNA mismatch repair protein MutS2
Organism
lpd  Secundilactobacillus paracollinoides
Pathway
lpd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lpd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    AYR62_07770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lpd03400]
    AYR62_07770
DNA repair and recombination proteins [BR:lpd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     AYR62_07770
SSDB
Motif
Pfam: MutS_V Smr MSSS AAA_22 Gp-FAR-1 MutS_III AAA_14
Other DBs
NCBI-ProteinID: ANZ63983
Position
complement(1713942..1716302)
AA seq 786 aa
MNDKIFKTMAFDQIKQQLRAHLVSASGESELNHLMPVADQETVQRAIDETKDGADVLRLE
GGIPLPKMADVTPHVKRLAIEGTLSGTELAQIGQVLKTVSRVVDFFDGLQDKALELRRLY
AIVAELVHLPDVTRRLSMSVTDDGRLTDEASPELKRIRRRITQIEGSVRSQMNGYTRGKQ
AKYLSETLVTIRDDRYVLPVKAEYKNHFGGIVHDQSASGLTLYIEPEAVVSENNRLREAQ
IAERQEERRILLELSNLLRPYQDDISANATVLGHLDFINAKARYAHEIKATEPLLSAENH
VNLRQARHPLIDQKKVVANDIEIGGDYKAIVVTGPNTGGKTITLKTLGLTQLMAQSGLFI
PANENSQVGLFDEVFADIGDEQSIEQNLSTFSSHMDNIAAILKAATDHSLILLDEVGAGT
DPQEGAALAMAILDNVGTIGSEVIATTHYPELKAYGYNRPETINASMEFDQETLKPTYHL
LIGIPGRSNALEIAQRLGLDQSIIDEARGLTDQDSQDLNQMIASLTEQTRQANVDAAAAA
DKLHENEALYADLQKQFDAYQKQKSQLMEDAKRHANEVVDQTKKQADKIIKDIRKKQLAA
GKTVIKEDQLIDAQGSINALHQDETLTQNRVLNREKRKHQLKKGDEVLVKSYGQRGVIMD
KLDDHNYEVQMGILKMKIDDSDLEKAAPEATTKKAPKATIRRTRSDGMTPTLDLRGHRYE
EAMAEVDRYIDSALLAGYPSVTIIHGKGTGALRQGVIDYLKSNRRVKSFGFSPANAGGDG
STIVKL
NT seq 2361 nt   +upstreamnt  +downstreamnt
atgaacgataaaatatttaaaaccatggcgtttgatcagatcaagcagcaattacgggca
catttggtttcagcttcaggagaatctgaactgaaccatttaatgccagttgcagatcaa
gagactgttcaacgcgctattgatgaaacgaaagacggggctgatgtcttgcggttagag
ggcggtattccactgccaaaaatggctgacgttaccccgcacgttaaacggttagcaatc
gaaggcacgttaagcgggactgaattggcgcaaattggccaggtcttaaaaacggtcagt
cgggtcgttgacttctttgacgggctccaggataaggcacttgaattgcgtcggctgtac
gcgattgtcgcggaacttgtgcatttgccagacgtgacgcgtcggttaagtatgtcggtg
acggatgatggtcggcttacggatgaagcgtcaccagaattgaaacgaattcggcgacgg
atcacgcagatcgaaggtagtgtgcgctcacaaatgaacggctatacacgcggtaaacag
gcgaagtatctcagcgaaacgctggtgaccattcgggatgaccggtacgtgttacccgtt
aaagcggagtacaagaaccattttggcggcattgttcacgatcagtctgccagtgggttg
acgctctacattgaaccggaagccgttgtctcagaaaacaaccggttacgtgaagcgcaa
attgcggaacgtcaagaagagcggcgaatccttctggaattgtcgaacctgttacggccg
tatcaggatgatatttcagcgaatgccacggtgctgggtcacttagactttatcaacgct
aaggctcggtatgcacacgaaattaaggcgacagaaccgcttctttcagctgagaaccac
gtgaatttgcgtcaggcaagacacccgttgatcgaccagaaaaaagtggtggctaacgac
atcgaaattggcggcgactacaaagccatcgtggtcactggtccaaacacaggtgggaaa
accatcacgttaaaaacactggggttgacccagctgatggctcagtctggactgtttatt
ccggcaaatgaaaatagccaggttgggttgtttgatgaagtgtttgccgacattggcgac
gagcaatccattgaacaaaatctgtcaactttttcttcacacatggacaacattgcggcg
attttaaaggcagcaactgatcacagtttgatcctactggatgaagtgggcgctgggact
gatccgcaagaaggggcagcccttgctatggctattctggataatgttggcaccattggc
agtgaagtgattgcgacgacccactacccagaactcaaagcgtacgggtacaaccgacca
gaaaccatcaatgccagcatggagtttgaccaagaaacattgaaaccgacgtatcacttg
ctgattggaatccctggtcgcagtaacgcgttggagattgcgcagcggttggggcttgac
caatcaatcattgatgaagctcgtgggttaaccgatcaggacagccaggaccttaatcaa
atgattgcgtcactgaccgagcagacgcgccaagccaatgtggacgcagcggcagcggct
gataaattgcatgaaaatgaggcgctgtacgcagacctccaaaaacagtttgacgcttat
cagaaacaaaagagtcagctgatggaagatgcaaaacgccatgcaaatgaagtggtcgat
caaacgaagaaacaagcggacaagatcatcaaagatatccgtaaaaagcaattagcggcc
ggcaagaccgtcattaaagaagatcaactgattgacgctcagggcagtattaatgcgctg
catcaagatgaaaccttgacgcaaaaccgcgtcttgaatcgtgaaaagcgcaagcatcag
ctcaaaaagggtgacgaggtgctcgttaaatcctatgggcaacgtggtgtgatcatggat
aagcttgatgatcacaactacgaagttcagatgggaattttgaagatgaagatcgatgac
agtgatctggagaaagcagccccagaagcgacgacgaagaaggcgcctaaagccactatt
cgccgaactcgttctgatggcatgacgccaacccttgacctccgtggtcaccggtatgaa
gaagccatggcagaagtggatcgatacatcgattcagcactgcttgctggttacccttct
gtcacgatcattcacggcaagggtaccggcgcattgcggcagggtgtgattgactacctg
aaatccaatcgccgggtcaaatcgtttgggttttcacctgccaatgctggtggggatggc
tcaaccatcgttaaattataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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