KEGG T00946: JDM1

Lactobacillus plantarum JDM1: JDM1_1990

Entry

JDM1_1990 CDS T00946

Definition

UDP-N-acetylmuramyl tripeptide synthase ()

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

lpj Lactobacillus plantarum JDM1

Pathway

lpj00300	Lysine biosynthesis
lpj00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:lpj00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:lpj00550]

SSDB

Motif

Pfam:

DUF1727 Mur_ligase_M DUF2296 zf-CHY zf-H2C2_2 zf-TFIIB Zn_Tnp_IS1595 OrfB_Zn_ribbon DZR RRN7 Put_Phosphatase

Other DBs

NCBI-GI:

254557157

NCBI-GeneID:

8189938

UniProt:

C6VIB4

Position

2116036..2117382

AA seq 448 aa
MSINSTLATWTGKSAYWFLHTFRGGGSSLPGKLALKLDPTILKHLAKNYDVIVITGTNGK
TLTTALTVKVLREQYPDILTNPSGSNMKQGIVTTFLRAPKAHQKPLAVLEVDEANVIMVT
KYITPKAFVFTNIFRDQMDRYGEIYTTYQKILDGVALAPEATIIANGDLPLFNAKQLPNP
ILYYGFDYQPDHDQQAPANTDGLLCPRCQHILRYHSRTYSNMGKYYCPHCGFERPQLTYK
LNALTAMTPTSSDFEINGQAMHLNIGGQYNIYNALAAYAVGRFMDVTPAKIAHALSDNDE
QVFGRQETFHVGEKDVTLILVKNPVGLNQVLQTISTDDRPFSFAALLNANYADGIDTSWI
WDGNFEKLPALNIPAYISGGERYRDITFRLKVAGVPEDQLTIIPDLTNMTTAIQKLPTKQ
VYVVATYTAMLQLRKQLASQGIIDGGMA

NT seq 1347 nt +upstreamnt +downstreamnt
atgtcaattaatagtacattagccacctggacgggtaaatccgcatattggtttttacac
accttccgtggcggtgggagctcactccccggcaagttagcgctgaagctcgatccaacg
attttaaagcatctcgctaaaaactacgacgtcatcgtcatcactgggaccaacggtaaa
acgttaacgaccgccttgacggtcaaggttttacgtgaacagtaccctgacattttaacc
aatccaagcggatccaacatgaagcaaggtatcgtcacgacctttttacgggcacctaaa
gcgcaccaaaagccactcgcagttctagaagtcgacgaagctaacgtaatcatggtcacc
aagtacatcacaccaaaagcctttgtcttcacgaacattttccgtgaccagatggatcga
tatggtgaaatctacacgacatatcaaaaaatcttagacggggttgctttagcacctgaa
gcgacaattattgccaacggtgatttgccactcttcaatgccaaacaattgcctaatccg
atactgtattacggatttgactaccagcccgaccatgaccaacaagcgccagcaaatacg
gatggcctgctttgtccgcgttgtcagcatattttgcgttaccatagtcgaacttatagc
aatatgggcaagtattattgtccccactgcggttttgagcgtccacagttgacatacaaa
ttaaacgccctaaccgctatgacaccgactagctcagactttgaaatcaacggtcaggcc
atgcatcttaatatcggtggtcaatacaatatttataatgcgctagctgcctacgcggtt
gggcgcttcatggacgtcacgccggccaaaatcgcgcacgcccttagcgacaacgatgaa
caagtctttggtcgtcaagagacctttcacgttggcgaaaaggacgtcacgctgattctc
gtcaagaatccagtgggccttaaccaagtcttgcaaacaatcagcaccgatgaccggcca
ttctcatttgccgctctgctcaacgcaaactatgcagatggtattgatactagttggatc
tgggatggtaattttgaaaaattaccggcattgaatattcccgcctatattagtggcggt
gaacgttatcgtgatatcacgttccggctaaaagttgctggcgtaccggaagatcagtta
accattattcctgacctgaccaacatgacgaccgcaattcaaaaactaccgaccaagcaa
gtctacgtcgtcgcaacttacaccgcgatgttacaattacgaaaacaacttgctagccaa
ggcattatcgatggggggatggcttaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (28)   

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