KEGG   Lactiplantibacillus plantarum JDM1: JDM1_2296
Entry
JDM1_2296         CDS       T00946                                 
Symbol
nth1
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
lpj  Lactiplantibacillus plantarum JDM1
Pathway
lpj03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lpj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    JDM1_2296 (nth1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lpj03400]
    JDM1_2296 (nth1)
Enzymes [BR:lpj01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     JDM1_2296 (nth1)
DNA repair and recombination proteins [BR:lpj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     JDM1_2296 (nth1)
 Prokaryotic type
     JDM1_2296 (nth1)
SSDB
Motif
Pfam: HhH-GPD HHH
Other DBs
NCBI-ProteinID: ACT63183
Position
complement(2460319..2460969)
AA seq 216 aa
MLKDDQIVWAIHQMEADIGPVGPSLDSRTPFQYLISVILSAQATDVSVNKVTPVLFEKYP
EPKDLMAADVADVEAIIKSVGLFHNKARNIIKTARIVHEKLADVVPTDRKGIMALPGAGR
KTANVVLSDVFEQPTFAVDTHVSAISKRLHFVAQTATPLQVEQKIVSVLAPAELHQAHHT
MIEYGRKYSMKLTPDKEVCQLIIDCDKLNEENEALI
NT seq 651 nt   +upstreamnt  +downstreamnt
atgctaaaagatgatcagatcgtgtgggcaattcaccaaatggaagcagacatcggacca
gtgggaccttccctggactcgcggacgccgtttcagtatttgatttcagtaattctgagc
gctcaggcgaccgacgtctcggttaacaaggtgacgccggtgctgtttgagaagtatcca
gaaccaaaggacttgatggctgccgatgttgcggatgtggaagcaattatcaagagcgtc
ggattatttcataataaggcccgcaacatcattaaaacggcgcgcattgtccatgaaaaa
ttagccgatgtcgtgcctaccgatcgtaaaggcatcatggcgttaccaggtgcgggccgc
aaaactgccaacgtggtattgagtgacgtttttgaacaaccgacgtttgctgtcgataca
cacgtctcggcaatctcgaaacgcttgcactttgtcgctcagaccgcgacgccgttacaa
gttgaacaaaaaatcgtgagtgtgttggcaccggcagaattacatcaagcccatcacacg
atgattgaatatgggcggaagtattcgatgaagttgacgccagacaaagaagtttgtcaa
ttgatcattgactgtgacaagttgaatgaggaaaatgaagcgttgatctag

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