KEGG   Lactococcus piscium: LACPI_0274
Entry
LACPI_0274        CDS       T03909                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha RpoA
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
lpk  Lactococcus piscium
Pathway
lpk03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lpk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LACPI_0274 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lpk03021]
    LACPI_0274 (rpoA)
   03400 DNA repair and recombination proteins [BR:lpk03400]
    LACPI_0274 (rpoA)
Enzymes [BR:lpk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     LACPI_0274 (rpoA)
Transcription machinery [BR:lpk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     LACPI_0274 (rpoA)
DNA repair and recombination proteins [BR:lpk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      LACPI_0274 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 Mg_chelatase_C
Other DBs
NCBI-ProteinID: CEN27474
UniProt: A0A0D6DU47
Position
I:275129..276064
AA seq 311 aa
MIEFEKPKITKFDEENVYGKFVIEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDGVL
HEFTTIPGVHEDVIQVILAIKGLAIKSYVETEKIIELDVTGPAVITAGDILTDSDIEIVN
KDHYLFTLAEGHSVNARMTVKSGRGYVLAEENKQSDAPIGTIAVDSSYTPVNKVNYQVEP
ARVGEKDNFDKLSLEIFTNGTISAEDALSLSAKILTDHLSLFVNLSEVAQTADTLVDKNE
VKPERALDKVIEELDLSVRSYNCLKRAGINTVADLADMSEPEMLKVKNLGRKSLVEVKDK
LDSLGLSLKKD
NT seq 936 nt   +upstreamnt  +downstreamnt
atgattgagtttgaaaaaccaaaaattacaaaatttgatgaagaaaatgtctatggtaaa
tttgtcatagaaccgcttgaacgtggttatggtacaacccttggtaactcattgcgtcgt
attcttctttcgtcacttcctggggctgctgttacaagcatccaaattgatggtgtactc
catgagttcacaaccattccaggcgtgcatgaagatgtgattcaagtaattcttgccatt
aagggacttgcaatcaaatcatatgttgaaacggaaaaaattattgaacttgatgtaact
ggacctgcagtcataacagctggagacatccttactgatagtgatattgagattgttaat
aaagatcattacctatttacacttgcagaaggtcactcagtgaacgcccgcatgactgta
aaatcaggtcgtggttatgttcttgcagaagaaaataaacaatctgatgccccaatcggg
acaattgctgtagattcatcttatacaccagttaacaaagttaactatcaagttgaacca
gcacgtgttggtgaaaaagacaactttgacaaattgtcattggaaatctttactaacggc
acaatctctgcagaagatgccttgtcattatctgcaaaaatcttgactgaccatttaagt
ctttttgttaatctgtctgaagtagctcaaactgctgatacattggttgataaaaacgaa
gtaaaaccagagcgtgctttggataaagtcatcgaggaacttgatctttctgttcgttct
tataactgtttgaaacgtgccggtattaatactgttgctgatcttgctgatatgagtgaa
ccagaaatgcttaaagttaaaaacttgggtcgtaaatcattggtagaagtcaaggacaaa
cttgacagcctcggtttatcacttaagaaagactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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