KEGG   Lactiplantibacillus plantarum WCFS1: lp_0772
Entry
lp_0772           CDS       T00115                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC, subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
lpl  Lactiplantibacillus plantarum WCFS1
Pathway
lpl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lpl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    lp_0772 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lpl03400]
    lp_0772 (uvrB)
DNA repair and recombination proteins [BR:lpl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     lp_0772 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      lp_0772 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_5 AAA_7 AAA_30 AAA_19 AAA AAA_22
Other DBs
NCBI-ProteinID: CCC78235
UniProt: Q88YI8
Position
705173..707176
AA seq 667 aa
MIDRVDNNHFDLVSDYQPTGDQPQAIQQLTAGIESGEKEQILLGATGTGKTFTISNVIAK
VNKPTLILSHNKTLAGQLYGEFKKFFPNNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSAI
NDEIDKLRHSATSSLLERNDVIVVASVSSIFGLGDPHEYQDHVVSLRVGMEIDRNDLLRK
LVDIQFDRNDIDFQRGRFRVHGDVVEIFPASRDDHALRVEFFGDEIDRIREIDALTGEIV
ADREHVAIFPATHFMTNDAIMEHAIKGIEDELDGRLKELTADGKLLEAQRLKQRTTYDVE
MLKEMGYTSGIENYSRFMDGRKPGEPPYTLLDFFPKDFLLVVDESHVTMPQVRGMYNGDR
ARKQMLVDYGFRLPSALDNRPLKLEEVEQHINQVVYMSATPGPYEMDRTKHVVQQIIRPT
GLLDPTIEVRPIMGQIDDLVGEINKRIEVNERVFITTLTKKMAEDLTDYFKDLGIKVRYL
HSDIKTLERTQIIRDLRLGKFDVLVGINLLREGIDVPEVSLVAILDADKEGFLRNERSLI
QTIGRAARNEHGSVIMYADTTTDSMQAAMDETARRRAVQMKYNEDHHITPHTIKKAIPEL
IASTKTTEDAGKKDDFLETDFDDMTREQQLDMISKLEEQMKTAAKKLDFEQAATLRDTVM
ELKAQIS
NT seq 2004 nt   +upstreamnt  +downstreamnt
ttgattgatcgggtagataataatcattttgacttagtttcagattaccaaccaacgggc
gatcaaccccaagcgatccagcaattaaccgctggcattgaatcgggagaaaaagagcag
atcttgttgggggcgaccgggaccgggaagacctttacaatttcgaacgtgattgcaaag
gtgaataagccaacgttaatcttgtcacataacaagacgttagcgggtcaattatacggg
gagtttaagaagtttttcccgaacaatgccgttgaatattttgtgagttattacgattat
tatcagccggaagcgtacgtgccttcgagtgatacctatatcgaaaaggactcggcaatc
aacgatgaaatcgataagttacggcactctgcgaccagctcattattggaacgcaacgat
gtgatcgtcgtggcatcggtctccagtattttcggtttaggtgatcctcacgagtaccaa
gatcacgtagtctcactgcgagtcggcatggagatcgaccgcaatgatctgttgcgtaaa
cttgttgatattcaatttgatcgtaacgatattgatttccagcgggggcgttttcgggtc
catggtgatgtcgtagaaatctttccggcttcacgggatgaccacgcattgcgcgttgaa
ttctttggcgatgagattgatcgaatccgtgagattgacgccttaaccggtgaaattgta
gctgatcgtgaacatgttgcgatcttcccagcgacccactttatgacgaatgatgcgatt
atggaacacgccatcaagggcattgaagatgagttggatggccgcctgaaagaattgaca
gccgatggcaaattgttagaggcgcaacgactcaagcagcggacgacctatgatgtcgaa
atgctcaaagaaatgggctacactagtggtatcgagaactattcacgttttatggatggc
cgtaaacctggcgaaccaccgtatacgttactggacttcttcccgaaggactttttgctc
gtggtcgatgagtcacacgtgacgatgccccaagttcggggaatgtataatggggaccga
gcacgtaaacaaatgctagtcgattatggcttccgtttgccaagtgcgttggacaaccgg
ccattgaaacttgaagaagttgaacagcatattaatcaagtggtttatatgtccgcaacg
ccgggcccttacgaaatggatcggaccaagcatgtcgtccagcaaattattcgaccaact
ggtttattggatcctacgattgaggttcgaccgattatgggtcagatcgatgacttagtg
ggtgaaatcaataagcgcattgaggtcaacgaacgggtctttatcaccacgttaactaag
aagatggcggaagatttgaccgactactttaaggatttaggcatcaaggtacggtacttg
cacagtgatattaagacgttggaacgaacgcagatcatccgcgacctgcgtctgggcaag
ttcgatgtgttggtcgggatcaacttgttgcgggaaggaattgacgttcccgaagtttca
ctagttgcgattttggatgcggataaggaaggtttccttcgtaacgagcgttcgttgatc
caaacgattggtcgggcggctcgtaatgagcacggttcagtgattatgtacgctgacacc
acgactgattcgatgcaggccgcgatggatgagactgcacgtcgtcgtgccgtacagatg
aagtacaatgaagatcatcacatcacgccacatacgattaagaaggccattccagagcta
attgcttcgacgaagaccactgaagacgcgggcaagaaggatgacttcttagaaactgac
tttgatgatatgacccgtgaacaacaattagatatgattagtaagttggaagaacagatg
aagaccgccgctaagaagctcgactttgaacaagccgcaacgctgcgtgatacggtcatg
gaattgaaagcacaaattagctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (12)   
   Pfam (12)   
All databases (56)   

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