KEGG   Legionella pneumophila subsp. pneumophila Philadelphia 1 (serogroup 1): lpg1284
Entry
lpg1284           CDS       T00199                                 
Symbol
rpoS
Name
(GenBank) stationary phase specific sigma factor RpoS
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
lpn  Legionella pneumophila subsp. pneumophila Philadelphia 1 (serogroup 1)
Brite
KEGG Orthology (KO) [BR:lpn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lpn03021]
    lpg1284 (rpoS)
Transcription machinery [BR:lpn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     lpg1284 (rpoS)
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Dna2 POC1 PCI
Other DBs
NCBI-ProteinID: AAU27367
Pasteur: lpg1284
UniProt: Q5ZW04
Structure
Position
1411962..1413041
AA seq 359 aa
MLRSKKLFQGIAKHIGDTMQDDEEPIKDKEFKEEEWSEPDDESLLSEEDVEPDIEKMEEE
LDELPEFTDDETFPSFQRGKNIAKALDATQLYLGEIGFSPLLTAEEEIHYATLALKGDME
ARKKMIESNLRLVVKIARRYLNRGLPLLDLIEEGNLGLMKSVEKFDPKRGFRFSTYATWW
IRQTIERAIMNQTRTIRLPIHVVKELNVYLRAARQLTQKLDHEPSPEEIAEMVDKPLEDV
QKLLGLNDKVASVDTPIGFDETKSLLDTIADENSLNPAELLTNENLRQHIESLLDKLTEN
QQQVIARRFGLRGFEKATLEDVGKEIDLTRERVRQIQVEALKTLRTLLERVGLTQEDLF
NT seq 1080 nt   +upstreamnt  +downstreamnt
ttgttaagaagtaaaaaactatttcaaggcatagctaaacatataggtgatacaatgcaa
gatgatgaagagccaattaaggacaaggaatttaaagaagaggaatggtctgagccagat
gatgaatctctgttgtcagaagaagatgttgaacctgatatcgaaaaaatggaagaagag
cttgatgaacttccagagtttactgatgatgaaacttttccttcattccagcgcgggaaa
aatattgccaaggctttagatgcgactcaactttacttgggtgaaattggtttttctcct
ttgttaacggctgaagaagaaatccattatgcgactcttgctttaaaaggtgatatggaa
gcacgcaagaaaatgattgagtcgaatttgcgcctggtggttaaaatagccagacgttat
cttaatagaggattgcctcttcttgatctaatcgaagagggtaacctgggtttaatgaag
tctgttgagaaatttgaccccaagcgaggattccgtttttcaacttatgcgacctggtgg
attaggcaaactattgagcgcgcaattatgaatcaaacgagaactatccgtttgcctatt
catgtcgtgaaagaacttaatgtttatctcagagcggcaaggcaattgacgcaaaaactg
gatcatgaaccatcacctgaagaaatagcagaaatggtggataagcctttggaggatgtc
caaaaattattgggattgaatgataaagtcgcttcagttgatactccaattggatttgat
gaaaccaaatctttattagatacaattgctgatgaaaacagtttaaatcctgcagagctg
ctaaccaatgagaatttaaggcagcatatagaatctcttctggataaattaactgagaat
caacagcaggttatcgcaagacgttttgggttaagaggttttgaaaaagcgacactggaa
gacgttggtaaggaaattgatttgacccgagaacgcgttcgccaaattcaagttgaagcg
ttgaagacacttagaactttgttagagcgggttggactaacacaagaggatttgttttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
   PASTEUR (1)   
Protein sequence (1)   
   UniProt (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (7)   
   Pfam (7)   
All databases (23)   

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