KEGG   Legionella pneumophila Paris (serogroup 1): lpp2948
Entry
lpp2948           CDS       T00209                                 
Symbol
gidA
Name
(GenBank) hypothetical protein
  KO
K03495  tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
lpp  Legionella pneumophila Paris (serogroup 1)
Brite
KEGG Orthology (KO) [BR:lpp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lpp03016]
    lpp2948 (gidA)
   03036 Chromosome and associated proteins [BR:lpp03036]
    lpp2948 (gidA)
Transfer RNA biogenesis [BR:lpp03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    lpp2948 (gidA)
 Prokaryotic type
    lpp2948 (gidA)
Chromosome and associated proteins [BR:lpp03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    lpp2948 (gidA)
SSDB
Motif
Pfam: GIDA GIDA_C GIDA_C_1st FAD_oxidored FAD_binding_2 Pyr_redox_2 DAO Pyr_redox AlaDh_PNT_C HI0933_like Thi4 FAD_binding_3 NAD_binding_9 NAD_binding_8
Other DBs
NCBI-ProteinID: CAH14101
Pasteur: lpp2948
UniProt: Q5X0Z8
Position
3366010..3367884
AA seq 624 aa
MNLEQLYDVIVVGGGHAGTEAALAAARLGVKTLLLTHNIDLLGQMSCNPAIGGIGKGHLV
KEIDALDGAMAKAADQAGIQFRILNASKGPAVRATRAQADRVLYRKAIRTQLQSQANLTI
FQQAVDDLKIEGGLVTGVVTQMGLTLKARAVVLTVGTFLGGKIHVGMNQYAGGRAGDPPS
IALSKSLRDLDLPVGRLKTGTPPRIDRRTIDFSQMVEQPGDTPVPVFSYLGTASDHPQQV
PCHITHTTEATHDIIRNNLDKSPMYAGVIEGVGPRYCPSIEDKIVRFADKTSHQIFVEPE
GLTTEEIYPNGISTSLPFEVQVQFVRTIKGFENAHITRPGYAIEYDYFDPRGLTSFLQTK
AIPNLFFAGQINGTTGYEEAAAQGIIAGMNAALQIKDQELWCPRRDEAYIGVLIDDLITC
GTQEPYRMFTSRAEYRLLLREDNADLRLTEKGRQLGLVGDERWESFSKKREAIESTQALL
HNSWVRVHHNDLFKEALLNPMQHDCRAAEFLKRPEINYQHLLMMDDLNLPELPQEITEQI
EIQNKYAGYIDRQQQEIEKLRKHENTMLPETLDYNDVVGLSSEVIQKLNRIKPTSLAQAG
RISGVTPAALSLLLVHLKKSRLPV
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgaatctcgaacaattatatgatgtcatagtcgttggcggagggcatgctggtacagaa
gcagcgcttgcagcagcacgcctgggtgtaaaaaccttgttattaacccataacatagac
ttgcttggacaaatgtcctgcaatccagccatagggggcattggtaaaggtcacctggtt
aaagaaattgatgcccttgatggagcgatggctaaagccgccgatcaggcggggatccaa
tttcgaattcttaatgcctcaaaaggacctgcggttcgagccacacgcgcacaagcggat
cgtgttttgtatagaaaagccattcgaacacaacttcaatcacaagctaatttaaccatc
tttcaacaagctgttgatgatttgaaaattgaaggcggattagtcactggtgttgtaacc
caaatggggctcacgctcaaggcgcgtgctgttgtattaacagtagggacttttctgggt
gggaagattcatgtcggtatgaaccaatacgcaggaggcagagcaggagatcctccatcc
attgcgttatctaaaagcttgcgggatttggatttaccggtaggacgtttgaaaacagga
actcctcctcgaattgacagacgcaccattgattttagccagatggtggaacaaccaggt
gataccccggttccagtattttcctatttgggaacggcaagcgaccatcctcaacaagtg
ccatgccatattacccatactacagaagccactcatgacataataagaaataatttggat
aaatcgccaatgtatgcgggagtgattgaaggagttggacctcgttattgcccctcgata
gaagacaaaattgttcgctttgctgataaaacatctcaccagatttttgtggaaccggaa
ggtctgacaacggaagaaatataccctaatggaatttctaccagcctccccttcgaggta
caagtgcaatttgtgcgcaccattaaaggttttgaaaatgcccacatcaccaggccaggt
tacgccatcgagtatgattattttgatccacgtggattaacctcatttttgcaaaccaag
gcaattcctaatttgttttttgccgggcaaatcaatgggacaaccggatatgaggaagcg
gcagcgcagggaattatagcgggcatgaatgctgccttgcaaatcaaagatcaagagttg
tggtgtcctcgcagagatgaggcatacataggcgtacttatcgatgatttgattacttgc
ggaactcaagaaccctataggatgtttacttcaagagccgagtatcgtttgttattgcgt
gaagataatgccgatttaagactgaccgaaaaaggccggcagcttggcctggtaggtgat
gaacggtgggaaagcttttccaaaaaacgtgaagcgattgaatcaactcaggctttgtta
cacaacagctgggtgagagtccatcacaatgatctgtttaaagaagccttgcttaaccca
atgcaacacgattgccgcgccgctgaatttttgaaacggccagaaattaactaccagcat
cttttaatgatggatgatttgaatttacccgaattgccacaagaaataacagagcaaatt
gaaattcagaataaatatgccgggtacatagacaggcaacaacaagaaattgagaaatta
cgcaagcatgaaaataccatgctccctgagactttggattataatgacgtcgttggttta
tcaagtgaagtcatccaaaaattaaaccggattaaaccaacttctttggctcaagccggg
cggatttctggcgtaacacctgccgctctgtctcttttacttgttcatctgaaaaagagt
cggcttccagtatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   PASTEUR (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (14)   
   Pfam (14)   
All databases (33)   

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