KEGG   Lactiplantibacillus plantarum ST-III: LPST_C1720
Entry
LPST_C1720        CDS       T01324                                 
Symbol
recJ
Name
(GenBank) single-strand DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lps  Lactiplantibacillus plantarum ST-III
Pathway
lps03410  Base excision repair
lps03430  Mismatch repair
lps03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LPST_C1720 (recJ)
   03430 Mismatch repair
    LPST_C1720 (recJ)
   03440 Homologous recombination
    LPST_C1720 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lps03400]
    LPST_C1720 (recJ)
DNA repair and recombination proteins [BR:lps03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     LPST_C1720 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     LPST_C1720 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      LPST_C1720 (recJ)
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1
Other DBs
NCBI-ProteinID: ADN98936
Position
complement(1846634..1848970)
AA seq 778 aa
MLAAKKKWVPRLTTAVDEADVDKLAEAASVTPLVARLLIMRGINTAEEAAPFLHADQQPL
LDPTTMHDMEKAVDRIQEAIIAGDQITIYGDYDADGLTSTSIMYETLDQIGANVNYYIPD
RFKDGYGPNQAAFDRLIAAGTKLFVTVDNGVAGNAVINQVQEQGIDVVVTDHHELPTELP
HAYAIVHPRHPEGSYPFGGLSGAGVAFKVATALLEEVPEELLDLAAIGTVADLVSLTGEN
RTLVTLGLKVLQQTTRPGLAALIQEAGLIPDKLTETNIGFGIAPRLNALGRLQSAQSGVE
LLTTLDDERATALAKQVNQLNEKRQGLVKTISASAIEQAQTPENEARQTLVITGHGWHEG
VLGIVASHVVETSGKPTLVLNEDDDGRLKGSGRSVEAYNLFAAIDPVRESLVAFGGHHMA
VGLTVMADQLATLKEAMEAAAVSQQLADNAQVSLPIDGTLPLAEATLATLADIQALAPFG
TDNPAPLFELVPTTVPQARAIGSDQQHLKLQLGDGTNTIDAIGFSMGTALPAIQASPTDV
TLVGELSENTWNGQTKPQIMVKDIAVTGTQVIDARTQHLSAHLFQAPGVYLFFHQRLLKK
VEQYLGSQAQAVWVGDTKTDLTAVTANQAVFIVDCPDTLADMTQVLSTIALDQLTLYLYR
QESVYLTGMPNRAQFAKLFQFTAAHHDVDIHHQLTLVAKHLHIERNLLIFMIQVFFEVGF
VKINDGVMNGVSNPAKADLHHAPSYQLREQQIVAEETLLYSKSAALQVWVKNQAAVKN
NT seq 2337 nt   +upstreamnt  +downstreamnt
atgttagcggcaaagaaaaagtgggtgccacgtttaacaacggccgttgatgaagccgat
gttgataagttagctgaggcggccagcgtgacccccttagttgcccggttattaataatg
cggggcattaatacggcggaagaagccgctccattcctgcacgcagatcaacaaccattg
ttggatccaacgaccatgcacgatatggaaaaagccgttgaccgcattcaagaggcgatt
attgccggggatcaaattaccatttacggtgattatgatgcagatggtttaacaagtacg
tcaattatgtatgaaacgttggaccaaattggcgctaacgtgaattactatattccagat
cgtttcaaggatggttatgggcctaatcaggctgcttttgaccggctgattgcggctgga
acgaagctgtttgtgacggtggacaacggtgtcgcgggaaatgcggtcatcaatcaagtg
caggaacagggcatcgatgtcgtggtgaccgatcatcatgagttaccgactgaattgccg
cacgcttacgccattgtccatccacgacatccagagggcagttatccatttggtggtctt
tctggtgccggtgtggcgtttaaagtagcaacggcgctgcttgaggaagtacccgaggaa
ctgttagatctggctgctattggaacggttgctgatttggtcagcttaactggtgaaaat
cggactttggtaacgctcggcctgaaggtcttacagcagacgacccgcccaggcttggcc
gcactgattcaagaagccggattgattcccgataaattgaccgagaccaatatcgggttt
ggtattgcccctcggctaaacgcacttggccgtctgcagtcggcgcagagcggtgtagaa
ttattgacaactttggacgatgagcgggcgaccgcgctggccaagcaggtcaatcaattg
aatgaaaaacgccaaggcttggtcaagacaatcagtgccagtgcaatcgagcaagcacag
acgccggaaaatgaggcccgccaaaccttagttattaccgggcatggttggcacgagggt
gttttgggaatcgtcgcgagccacgtggtcgaaacgtctggcaaaccaaccctagtgtta
aatgaggatgatgatggccggctcaaaggtagtggtcggagcgttgaagcgtataattta
tttgccgcaatcgacccagttcgtgagtcattggtggcttttggcggtcatcatatggcg
gttggactaactgtcatggccgaccagttagcaacgcttaaagaggcgatggaagcggcg
gcggttagtcagcaattagcagacaatgcgcaagtcagtttaccaattgacggcacgtta
ccattagctgaggcaaccttggcaactctggcagatattcaagcgttggccccctttgga
acggataacccggcaccgttgtttgaattagttccaacgactgttccgcaagcacgcgcg
attggtagtgatcagcaacacttgaaattacaactgggtgatggcaccaatacgattgat
gctatcggtttttcgatgggtactgccttgccggctattcaggcgagtcccaccgatgtg
acgttagtgggtgagttgagtgaaaatacttggaacggtcagacaaagccccaaatcatg
gttaaggatattgcagtgacggggacccaggtgatcgacgcccggacgcaacatctttcg
gcccatttgtttcaagcaccgggggtttacctctttttccaccagcgtctgttgaaaaaa
gttgaacagtatttaggttcccaagcgcaagccgtatgggtgggggatacgaaaacggat
ctgactgccgtgacggctaatcaagcggtcttcattgtcgattgtcctgacacgctggcg
gatatgacccaggtactcagcacaattgcgctcgatcagctgacgctctacttatatcgg
caagaatcggtttatttaacgggaatgccaaatcgcgcgcagtttgcgaaacttttccag
tttaccgcagcgcaccatgatgttgatattcatcatcaattaacattagtggccaagcat
ctgcatattgaacgaaatttgcttattttcatgattcaggtgttttttgaggtcggattt
gttaaaataaatgatggtgtcatgaatggcgtttcgaatccggcaaaagcggatttacat
cacgcccctagttatcagctgcgcgaacaacaaatcgttgctgaagaaacgcttttatat
agtaaatctgcagcgctccaagtatgggtgaagaaccaggctgcggttaagaattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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