KEGG   Lactobacillus rhamnosus LOCK908: LOCK908_1793Help
Entry
LOCK908_1793      CDS       T02731                                 

Definition
Formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lrc  Lactobacillus rhamnosus LOCK908
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:lrc00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    LOCK908_1793
Enzymes [BR:lrc01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     LOCK908_1793
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LOCK908_1793
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1754069..1754917)
Genome map
AA seq 282 aa AA seqDB search
MPELPEVETVRRSLLPLVKDKKITAISTNWEKILINGLTAFQKQVVGAAVTTIDRRGKYL
LIRLNNGMAIVSHLRMEGRYYVVSDAKTPLDKHDHVTFTFQDGSQLRYRDLRKFGRMRLI
HTGQEQLVPALAKLGPEPTAATFSENDFSQKLKRHHKAIKSVLLDQTVVAGIGNIYADEV
LWLSKLNPLQPANTLTKAEVHTLHDAIIKELDDAIAAGGTSAHTYVDAEGNRGSFQDALH
VYDREGTPCDRCGTTIVKIKVGQRGTYYCPHCQPLHRRGQLA
NT seq 849 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacctgaagttgaaacggttcgccgttccttgttaccgttagtcaaagat
aaaaaaatcaccgcgattagcacaaactgggagaaaatcctcatcaatggtttgacagct
tttcaaaaacaggtcgtgggcgctgccgtcaccacgattgatcgccgcggtaagtattta
ctgattcggcttaacaacggcatggcgattgtcagtcatttgcgcatggaaggccgctat
tacgttgtttcggatgccaaaacgccgctggataagcatgatcatgtgacgtttaccttt
caggatggcagccagttgcgttaccgcgatctgcgcaagtttggccggatgcggctgatt
cacacgggtcaggagcaattggtgccagcgctggccaagctaggaccggagccgactgct
gctacttttagcgaaaatgacttttcccagaaactaaaacggcatcataaagccattaaa
tcggttttgctggatcaaactgttgtggccggaatcggcaatatttatgctgatgaggtc
ttatggctcagcaagctcaatcccctgcagccagctaataccttaaccaaggcggaggtt
cacacgttacatgatgcgattatcaaggaattggacgacgccattgccgctggcgggacc
agtgcccatacttacgttgatgctgaaggcaatcgcggttcgtttcaggatgctttgcat
gtctatgatcgtgaagggacgccttgtgatcgttgcggcaccacgattgtcaaaatcaaa
gtcggtcaacgcggcacgtattattgcccgcattgccagccgctacatcgaagggggcaa
ctggcatga

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