KEGG   Lactobacillus reuteri JCM 1112: LAR_1180Help
Entry
LAR_1180          CDS       T00735                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lrf  Lactobacillus reuteri JCM 1112
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:lrf00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    LAR_1180
Enzymes [BR:lrf01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     LAR_1180
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LAR_1180
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1330597..1331427)
Genome map
AA seq 276 aa AA seqDB search
MPELPEVETVRRGLLKIAAKRKINAIDVYYGKTITNDVEDFRQALIGQTIENIDRRGKYL
LFRFTNDLTMISHLRMEGRYYNQPIGGPIDKHTHVVFEFTDGTELCYQDTRKFGRMTLVK
TGDEMNVGGLKTIGPEPTEDAFTLPYFTTELKKSRGKIKPFLLNQRHVAGLGNIYVDEVL
WMTGINPEQPANTLTANQIAELRENIIKELATAIKYKGTTVHSFTNAFGDAGAFQDRLKA
YGHAGDECPRCGTKMVKIKVAERGTTFCPHCQVLKE
NT seq 831 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattaccagaagttgaaactgttcgccgcggtttgctgaagattgccgctaag
cgtaaaattaacgcgatcgatgtttattatggtaaaacgattaccaatgacgttgaagat
tttcggcaggcgttgattggccagacgattgaaaatattgatcggcgaggaaaatatctt
ctttttcgtttcactaatgatttgacgatgatttcacatcttcgtatggaaggaagatat
tacaaccaaccgattggcggaccaattgataaacatacccatgttgtctttgaatttaca
gatggtacggaattatgttaccaagacacccgtaaatttggtcggatgacattggtaaaa
accggtgatgagatgaatgtcggtggattgaagacgattggccctgaaccgacagaagac
gcctttaccttgccatactttacaactgaattaaaaaagagtcggggaaagattaagcca
ttcttgctcaatcagcgtcatgtcgccggtctgggtaacatttacgttgatgaggtacta
tggatgacggggataaatccggagcaaccagccaatactttaacagctaaccagattgct
gaattacgggaaaatatcatcaaagaattggcgacagcgattaagtacaagggaaccact
gtgcatagttttacgaatgcatttggtgatgctggtgcttttcaagatcgcttaaaagct
tatggtcatgcgggggatgaatgtccgcgttgtggcacaaaaatggttaaaattaaggtt
gctgaacgcggaacgaccttttgtccccactgtcaagtattgaaggaatag

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