KEGG   Lactobacillus rhamnosus GG: LRHM_1696Help
Entry
LRHM_1696         CDS       T02100                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lrg  Lactobacillus rhamnosus GG
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:lrg00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    LRHM_1696
Enzymes [BR:lrg01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     LRHM_1696
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LRHM_1696
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1780449..1781297)
Genome map
AA seq 282 aa AA seqDB search
MPELPEVETVRRSLLPLVKNKKITAISTNWEKILINGLATFQKQVVGAAVNTIDRRGKYL
LIRLNNGMTIVSHLRMEGRYYVVSDAKTPLDKHDHVTFTFQDGSQLRYRDLRKFGRMRLI
HTGQEQLVPALAKLGPEPTAATFSESDFAQKLKRHHKAIKSVLLDQTVVAGIGNIYADEV
LWLSKLNPLQPANTLTKAEIHTLHDAIIKELDDAIAAGGTSAHTYVDAEGNRGSFQDALH
VYDREGTPCDRCGTTIVKIKVGQRGTHYCPHCQPLHRGGQLA
NT seq 849 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacctgaagttgaaacggttcgccgttccttgttaccgttagtcaaaaat
aaaaaaatcaccgcgattagcacaaactgggagaaaatcctaattaatggtctggcaacc
tttcaaaaacaggttgtgggcgctgctgtcaacacgattgatcgccgcggtaagtattta
ctgattcggcttaacaacggcatgacgattgtcagtcatttgcgcatggaaggccgctat
tacgttgtttcggatgccaaaacgccgctggataagcatgatcatgtgacgtttaccttt
caggatggcagccagttgcgttaccgcgatctgcgtaagtttggccgaatgcggctaatt
cacactggtcaggagcaattggtgccagcactggccaagctagggccggagccgactgct
gctacttttagcgaaagtgactttgcccaaaagctaaagcggcatcataaagccattaaa
tcggttttgctggatcaaactgttgtggccggaatcggtaatatttacgcggatgaggtt
ttatggctcagcaagctcaatcccctgcagccagctaataccttaaccaaggcggagatt
cacacgttacatgatgcgattatcaaggaattggacgacgccattgccgctggcggtacc
agtgcccatacttacgttgatgcagaaggcaatcgcggttcgtttcaggatgctttgcat
gtctatgatcgtgaagggacgccttgtgatcgttgcggcaccacaattgtcaaaattaaa
gtcggtcaacgcggcacgcattattgcccgcattgccagccgctacatcgaggggggcaa
ctggcatga

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